KEGG   Corynebacterium phocae: CPHO_01220
Entry
CPHO_01220        CDS       T05007                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cpho  Corynebacterium phocae
Brite
KEGG Orthology (KO) [BR:cpho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpho03032]
    CPHO_01220
   03400 DNA repair and recombination proteins [BR:cpho03400]
    CPHO_01220
Enzymes [BR:cpho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CPHO_01220
DNA replication proteins [BR:cpho03032]
 Prokaryotic type
  DNA Topoisomerases
   CPHO_01220
DNA repair and recombination proteins [BR:cpho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CPHO_01220
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: APT93585
UniProt: A0A1L7D651
LinkDB
Position
265636..268614
AA seq 992 aa
MASEAKQGKTLVIVESATKAKKIQPYLGSDYIVEASVGHIRDLPRGAADVPAKFKKESWA
RLGVNPEDDFTPLYVVSPDKKKKVADLKAKLKQCDQLFLATDPDREGEAIAWHLLEVLKP
KVPVRRMVFNEITKAAILEAAENTRELDVNLIDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRVIVERERERMAFVSAEYWDLQATVDAGSSYTPRSFDARLATVDGKRVA
AGRDFNDAGELKGKNVTVVGEAEAKALAEGLQDSQMYVANVEHKPYTRKPQPPFMTSTLQ
QEAGRRLHFTSERTMRIAQRLYENGHITYMRTDSTALSKQGLDAARSAATNNFGSEYVAS
SPRVYERKVKNSQEAHEAIRPAGESFATPGQLSGSLDAEEFKLYELIWKRTVASQMADAK
GNSVKVTVAGTAVTANGTPEVEFAATGRTITFPGFLKAMENDGTPKDENHLPNVQEGDGL
KATEVTADGHATNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVLSRGNALVP
SWVAFAVVGLLENNFTELVDYDFTSSMEDELDAIATGNEDRTQWLNAFYFGDESARGDKA
NSIARHGGLKSLIDVNLEAIDARQVNSIRLYTDDQDRDVFVRVGRFGPYIERQVGATADG
SPEYQRANLSETITPDELGKPLAEKLFATPQGGRELGENPANGRMVVAKDGRFGPYVTEV
VREDERARAESEAEEVVAKERAAEDAQRAAEGKRAKNWETKTAAKQKEKRVAEYIDESLR
PKTASLFSSMEPGTVTLEEALKLLSLPREVGTDDDGAVITAQNGRYGPYLKKGTDSRSLA
NEDQIFTISLDEARRIYAEPKRRGRAAAQPPLKQLGDNDVSGKPMTVKDGRFGPYVTDGT
TNASLRRGDDPAALTDARANELLSERRAKEAAGGSAPKKRATKKATKKATKKATKKATKK
ATKKATKKATKKATKKATKKATKKATKKATAK
NT seq 2979 nt   +upstreamnt  +downstreamnt
gtggcatctgaagctaaacagggcaaaaccctggtgatcgtggagtccgcaaccaaggct
aagaaaattcagccgtatttgggcagcgactacattgttgaagcgtcagtgggtcacatt
cgtgaccttcctcgtggtgcggctgatgtcccggctaagttcaagaaggagtcttgggcg
cgcttgggtgtgaacccggaggatgacttcacgccgctttatgtggtgagcccggacaag
aagaagaaggtagctgatcttaaagccaagctgaagcagtgtgaccagcttttcctggca
actgacccggaccgtgagggtgaggctattgcctggcacctgctggaggtgctcaagccc
aaggttccggtccgccgcatggtgttcaatgagattaccaaggccgccattttggaagcc
gctgaaaatacccgtgagctggatgttaacctgattgacgcccaggaaacccgccgtatt
ttggaccgcctttatggctatgaggtctccccggtgctgtggaagaaggttatgccccgc
ttgtccgctggccgcgtgcagtctgtggctacccgcgtgattgtggagcgtgagcgggag
cgtatggcttttgtttccgctgagtactgggatttgcaggccactgtggacgccggttct
tcttatacaccccgttcttttgatgcccgcctggccaccgttgatggcaagcgcgtggcc
gccggccgggacttcaacgacgccggtgagcttaagggcaaaaacgtcacggtggtgggg
gaagctgaggccaaggctttggctgagggcctgcaggactcccagatgtatgtggcaaat
gtggagcacaagccttatacccgcaagccgcagccaccttttatgacttccaccttgcag
caagaggccgggcggcgtttgcactttacctctgagcgcaccatgcgtattgcgcagcgt
ttgtacgaaaacggccacattacctatatgcgtacggactccacggcgctgtccaagcag
gggctcgatgccgcccgtagtgcagcgactaataacttcggatctgagtacgtagccagc
tccccccgtgtctacgaacgcaaggtcaaaaactcccaggaagcgcacgaggccatccgt
ccggcgggtgaatcttttgccacccctggccagctttccggcagtctggacgcggaggaa
ttcaagctctatgagttgatctggaagcgtacggtggcctcccagatggctgacgcgaag
ggcaattccgttaaggtcacggtggcgggtacggccgtgaccgctaatggcactccggag
gtggagtttgccgccaccggccgcacgattaccttcccgggctttttaaaggccatggaa
aatgatggcacgccaaaggatgaaaaccaccttcctaacgtccaggagggcgatggccta
aaggccacggaggtcacagcagacggccacgctactaacccgcctgcccgctatacggag
gcctccttggtgaagaagatggaggagctgggcatcggccgcccttcgacgtacgcgtcc
attattaagaccatccaggaccgtggttatgtgctctcccgtggcaacgcgttggtaccc
agttgggtggcttttgcggtggtgggcttgttggaaaacaactttaccgagctggtggat
tacgacttcacttcctcgatggaagatgagctagacgccattgccaccggcaatgaggac
cgcacgcagtggctcaacgctttctacttcggtgatgaatccgcgcgtggggacaaggca
aactcgattgcccgccacggcggcttgaaatccctcattgacgtcaacttggaggctatt
gatgcccgccaggtcaactccatcaggctttacacggatgaccaggaccgggatgtgttt
gtccgcgtgggccgctttggcccgtacattgagcgccaggtgggtgccaccgctgatggt
tccccggagtaccagcgcgctaacctgtctgagacaattaccccggatgagctgggtaaa
cccttggcggagaagctctttgctaccccgcagggcggtcgtgagctgggggagaacccg
gctaatggccgtatggtggtggccaaggatggccgctttggcccttatgtcacggaggtt
gtgcgcgaagatgagcgcgcccgtgcggagtctgaggcggaggaagtggtggccaaagag
cgcgccgcggaagacgctcagcgcgccgctgagggcaagcgggctaagaattgggagact
aagaccgccgctaagcagaaggaaaagcgggtggcggagtatatcgatgaatcgctgcgc
ccaaagacggcgtctttgtttagctccatggaaccgggcacggtgactcttgaggaagcg
ctgaagttactgagcctgccgcgtgaggtgggcactgatgacgacggcgcggtaatcacc
gctcaaaatggtcgttacggcccgtacttgaagaagggtacggattcccgctctttggct
aatgaggatcagattttcaccatctcgcttgatgaggcccgccgtatctacgctgagccc
aagcgccgtggccgtgccgctgcgcagccgccgctcaagcagctgggtgataacgacgtc
tccggcaagccgatgaccgtcaaggacggccgttttggcccgtatgtcactgacggcacc
acgaacgcctcgcttcgccgtggtgatgatccggctgctcttaccgatgcccgcgctaac
gagttgctctccgagcgccgcgccaaggaggccgccggcggtagcgccccgaagaagcgc
gcgacgaagaaggccaccaagaaagcgaccaagaaggcgaccaagaaggccaccaagaag
gcgaccaagaaagcgaccaagaaagcgaccaagaaggcgaccaagaaagcgaccaagaag
gcgactaagaaggcgacgaagaaggccaccgccaagtag

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