Corynebacterium phocae: CPHO_04400
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Entry
CPHO_04400 CDS
T05007
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03030
DNA replication
cpho03430
Mismatch repair
cpho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPHO_04400
03430 Mismatch repair
CPHO_04400
03440 Homologous recombination
CPHO_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpho03032
]
CPHO_04400
03400 DNA repair and recombination proteins [BR:
cpho03400
]
CPHO_04400
Enzymes [BR:
cpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPHO_04400
DNA replication proteins [BR:
cpho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPHO_04400
DNA repair and recombination proteins [BR:
cpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPHO_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APT92258
UniProt:
A0A1L7D2C4
LinkDB
All DBs
Position
1008739..1012308
Genome browser
AA seq
1189 aa
AA seq
DB search
MAKNSSFVHLHNHTEYSMLDGMAKVDLLAEEVSRQGMPAVAMTDHGNMYGSNAFYHAMVA
AGVKPIIGIETYMAPESRFNKKRLKWGTPDQKRDDIAGSGTYLHQTMLAENATGLHNLFK
LSSLASYEGQVGKYARMDADLVAEHADGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGRDNYFLELMDHGLDIEKRVRDELLEIGRKLDLPPLVTNDCHYVLESQARAHEAMLC
VQTGKTLMDTDRFKFDGTGYYVKTAQQMRELWDDTVPDGCDNTLWIAERVQDYGEIWEAH
PHDRMPIADVPEGHTPTSWLHHQVMEGLQDRFPGAEVPEDYVKRAEYEIEVIDMKGYPSY
FLIVAELIKHARSIGIWVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMISYAANRWGEDKVAQVITFGTVKTKQAIKDSAKVNYGQPGFQMADR
INGALPKAVMAKDIPLSGIMDPEHPRYQEANEVRQLIETDPDVKRIYETARGLEGVIRQA
GVHACAVIMASVPLMNHIPMWKRPADGAYITGWDYPSCEAIGLLKMDFLGLRNLTVIGDA
MENIKRNRGKEINLEDLHPDGEGMEPVYELLGRGDTLGIFQLDSGGMQELLKRMGPTGFN
DIVASLALYRPGPMGVNAHMDYADRKNGRKPIVPIHPELEEPLKEILGETYGLIVYQEQI
MEISRKVANYTAGEADGFRKAMGKKKPEVLAKEYDKFWSGMQDNGYSKSAMDSLWGTIEP
FASYAFNKSHAAGYGLVSFWTAYLKAFFAPEYMAALLTSVGDKKDKSAIYLADCRHLGIK
VLPPSVNESELDFQAVGEDIRFGLGAIRNVGKEVVDSIVSTRKKKGLFKNFSDYLDKIEL
VACSKRVTNSLIKAGAFDDLGHPRKGLLLIHEDAVDSVQSAKKAMDKGQFDLFAGLGGGA
DDSPSPFAIEVPDEHWDKKHQLTLEREMLGLYVSAHPLDGYESALDEQTNTPLTKILAEE
VHNGQEIIIGGIISAVDRRQSKKDGSPWAILTIEDSDGAQVSIMVFNKVYALVAPQIVED
NIILAKVNVKIRDGRLSLFCSDLRTADLGPGGGAGVPLRLNMRTEQCTLENLAKLKQVLQ
NNAGDSDVHLTLVHGDQSTVMVLGEHLRVERSGNLMGDLKATMGAGILG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaattcctcctttgtacacctgcacaaccacactgaatactccatgctagac
ggcatggcgaaggtggatctgctcgcggaggaagtctcccggcaaggtatgcccgcagtg
gccatgaccgaccacggtaacatgtacggctccaacgccttctaccacgccatggttgcc
gcgggcgtaaaacccattatcggcattgaaacctatatggcgcccgagtcccgtttcaac
aaaaagcgcttaaagtggggaaccccggaccagaagcgagatgatattgcaggttccggc
acctacctgcaccagaccatgctggcggaaaacgccactggcctacacaacctctttaag
ctttcttccctggcctcctacgaaggccaagtgggcaagtatgcgcgcatggacgcggac
ttggtggctgagcacgcggacgggatcatcgccaccactggctgcccctccggggacgtg
caaacccgcctgcgcctagggcagtttgaccaggcactcgaggccgcagccatgtggcaa
gacatctacgggcgggataattacttccttgagctaatggaccacggcctagatattgaa
aagcgggtgcgcgacgagctgctagaaattggccggaagctggatctgccgcccctggtg
accaatgactgccactacgtcctggagtcccaggcccgcgcgcatgaggccatgttgtgt
gtgcaaactggcaaaacgctcatggacaccgaccggtttaagtttgacggtaccggctat
tacgtcaaaaccgcgcagcagatgcgcgagctgtgggatgacacggtgcccgacggatgt
gacaacaccttatggattgccgagcgcgtgcaagactacggggagatctgggaggcacac
ccgcacgaccgcatgcccatcgcggacgtcccggaggggcatacccccacctcgtggtta
caccaccaggtgatggaggggctacaagataggttcccgggcgcggaggttccggaggac
tacgtcaagcgcgctgaatatgagattgaagtcattgatatgaagggctacccgtcctac
tttctcattgtggcggagttgatcaagcacgcgcgcagcattggtatctgggtgggaccc
ggccgtggttcggctgcgggctccttggtggcttacgcgctgaccattaccaacattgac
ccgatggagcacggcctgctcttcgagcgtttcctgaaccccgaacgcccctccgcaccc
gatatcgatatcgacttcgacgaccgccggcgcggggagatgatctcctacgccgccaac
cgctggggtgaagacaaggtggcccaggtcattacctttggcacggtgaagaccaagcag
gctatcaaggactccgccaaggtcaactacggccagccgggtttccagatggcggaccgg
ataaacggcgcgctgcctaaggccgtgatggccaaagacatacctctgtccggcattatg
gacccggaacacccgcgctaccaggaagccaatgaggtccggcagctcattgagacggat
ccagacgtcaagcgaatttatgaaaccgctcggggcctggagggcgtcatccgccaggcc
ggcgtgcacgcgtgcgcggtgattatggcgtccgtgccgctgatgaaccacatccccatg
tggaagcgtcccgccgatggcgcctacatcaccggctgggactacccctcctgtgaggcc
atcgggctgctgaagatggacttcctggggctaagaaacctcaccgtcattggcgacgcc
atggaaaacatcaagcgcaaccgcggcaaagagatcaacctcgaggacttgcacccggac
ggggagggcatggagcccgtctatgagttgctgggtcgcggggataccctgggaatcttc
cagctggactccggcggcatgcaggagctgctcaagcgcatgggacccacggggttcaac
gatatcgtggcgtccttggcgctctaccgcccaggccccatgggcgtgaacgcgcacatg
gattacgcggaccgcaagaacgggcgcaagccaattgttcccattcacccggagttggaa
gagcccctcaaagaaatcttgggtgagacttacggcctgatcgtttatcaagagcagatc
atggagatctcccgtaaggtggccaactacaccgccggtgaagcagatggtttccgtaag
gccatgggtaagaaaaagcccgaagtcttggccaaggagtatgacaagttctggtcaggg
atgcaggacaatggttattccaagagcgccatggactccctctgggggaccattgagccc
tttgcttcctacgcgtttaacaagtcccacgccgccggttacgggctggtgtccttttgg
acggcctacctcaaggccttcttcgcgccggagtacatggcagcgcttttgacctccgtg
ggggataagaaggacaaatccgcgatctacctggccgactgccggcacctaggaattaag
gtactgccgccctcggtcaacgaatcagagctggatttccaggccgttggggaagacatc
cgctttggcctaggcgctatccgcaacgtgggtaaagaagtggttgattcgattgtctcc
acgcgcaagaagaagggcctattcaagaatttctccgattacctggacaaaattgagctg
gtagcctgctcgaagcgtgtgaccaactcgctgattaaggccggtgccttcgacgacctg
ggccacccgcgcaaggggctgttgctcatccacgaagacgccgtagactccgtgcagagc
gcgaagaaggccatggacaaagggcagtttgatctattcgcgggcctgggcggcggcgct
gatgactctccgtccccgtttgccattgaggtcccggatgagcattgggataaaaaacat
cagctgaccttggagcgcgagatgctggggctctatgtttccgcgcacccgctggatggg
tatgagtccgctttggatgagcaaaccaatactccgctgaccaaaatcctggcagaggaa
gtccacaatggccaggaaatcatcatcggtgggattatttctgccgtggataggcggcag
tccaaaaaggacggatcaccgtgggcaatcttgaccatcgaggattccgatggcgcccag
gtgtccatcatggttttcaacaaggtctatgccctggtcgctccccagatcgtggaagac
aatatcatcttggccaaggttaacgtgaagatccgggatggacgtttgtcgctgttttgc
tcggatctccgcactgcggacctggggccggggggcggtgccggagtgccgctacggctc
aatatgcgtaccgagcagtgcaccctggaaaatctggccaagctcaagcaggtgttacaa
aacaacgccggtgattccgatgtccacctcacgctggtgcacggagaccagtccaccgtc
atggttttgggcgagcacctccgggtggagcgtagcggcaacctcatgggggatctcaaa
gccaccatgggggcggggatcctgggctag
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