Corynebacterium phocae: CPHO_05225
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Entry
CPHO_05225 CDS
T05007
Name
(GenBank) RNA polymerase sigma70
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cpho
Corynebacterium phocae
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpho03021
]
CPHO_05225
Transcription machinery [BR:
cpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPHO_05225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
APT92395
UniProt:
A0A1L7D2S4
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All DBs
Position
complement(1192631..1193641)
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AA seq
336 aa
AA seq
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MTTSSAASKSAGSSVFPDEDQVDRGSRRNQTNDNPSADLVRVYLNGIGKTALLSAEDEVE
LAQRIEVGLYAEYKLKNAAKLTRAEKRDLKILARDGKKARSHLLEANLRLVVSLAKRYTG
RGMPLLDLIQEGNLGLIRAMEKFDYSKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHL
VEQVNKLSRIKREMYQSLGREATNEELSEESGIEESKIEMLLRQSRDPVSLDMPVGADEE
APLGDFIEDAEATDAESAVVAAMRHSDIRDVIQTLEDREQDVIRLRYGLDDGVPRTLDQI
GRQFGLSRERVRQIEREVMAKLRDGNRANRLRDYAL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgactacatcatccgctgcgtcgaagtccgcgggaagttccgtgttccctgacgaagat
caggtagaccgtggatcccgccgaaaccaaaccaatgacaatccttctgccgatttagta
cgtgtttatctcaacggaattggaaaaaccgcgctcctcagcgccgaagatgaggtagag
ctcgctcagcgtattgaggtgggactctatgccgaatacaagttaaaaaacgccgccaag
ttaacccgtgcggaaaagcgtgacctaaagattttagcccgggacggcaagaaggcacgc
tcccaccttttggaggcaaacctgcggttagtcgtctctctggccaagcgctataccggc
cgcgggatgcctttgctggatctcatccaggaggggaacctcggtctcattcgtgcgatg
gagaaattcgattactccaagggctttaaattctccacttatgccacgtggtggatccgc
caagctatcacccgtggaatggctgatcaatcgcgcaccatccgcctcccggtccacctg
gtagagcaggtcaacaaactttcccgcattaaacgggagatgtaccagtccctgggccgt
gaggcaaccaacgaggagctgtcggaggaatccgggattgaggagtccaaaatagagatg
ctcctccgccagtcccgcgatccagtttccttggacatgcctgttggcgcggatgaggag
gctccactgggggacttcatcgaggacgctgaagccacagacgcagaatccgctgtggta
gccgccatgcgccattcggatatccgggatgtcattcagactttggaagatcgcgagcag
gacgtcatccgcctgcgctacggcctagatgacggcgtcccccgtacgctcgaccagatt
ggccgccagtttgggctctcccgtgagcgggtccgccagattgaacgcgaagtcatggcc
aagctacgtgacggtaaccgggccaaccgtttgcgcgactacgcgttataa
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