Corynebacterium phocae: CPHO_07555
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Entry
CPHO_07555 CDS
T05007
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpho
Corynebacterium phocae
Pathway
cpho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPHO_07555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpho03021
]
CPHO_07555
03019 Messenger RNA biogenesis [BR:
cpho03019
]
CPHO_07555
Transcription machinery [BR:
cpho03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPHO_07555
Messenger RNA biogenesis [BR:
cpho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPHO_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
S1CSD-TOTE-2
NACHT
AAA
SAP
Motif
Other DBs
NCBI-ProteinID:
APT92771
UniProt:
A0A1L7D431
LinkDB
All DBs
Position
complement(1685772..1687952)
Genome browser
AA seq
726 aa
AA seq
DB search
MTTTDNTAANDLGSMKLTELRKLAAQRGLKGISALRKGALIEAIKNGSVPQKAKDEAEKA
AKKQSADANAAEGSESSDNSAASGRKRRATRSVLGGDSPRRAVRRNSEQLDADNNHDASK
EDAQESKDSSSRSRDNSDTEENFETRSQARRARRNRNRRDNQGDGNSADDRRSGDSADKE
AFSKEKEDDKGANSGSNTGDSQNDSGSSDNSDKRGSGEDDSNNRGRGRRGDRNNRDRNNN
RGRNGNNGNHANNGNNNDDNSGDDNDSGDNNNRDNNRGGRSNDRGDRNDRGDRNDRGGRN
GRRGRRNRRNEGGSGNGNGNSRGNGNNNDLQIREGDETQAVGGILEVVDNNVAFLRTTGY
HAGASDVFVNNNLVRRLNLRSGDAVTGLVKVGGNTHTVGNGRNRRKYNQLAQVDSVNGLE
PAAASQRPKFSQLTPLYPNQRLRLETDQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTT
IMKSIANAISTNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELA
IERAKRLVEQGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARN
IEDGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRHISERRIFPAVDVNPSGTR
KDELLLVPEEARIMTKLRRILAGLDSFAAIDLLIKQLKKTKSNGEFLMQVASSAPMVANT
EEEDYS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactacggacaacaccgcagccaacgaccttggatcgatgaagctgacggaattg
cgcaagcttgccgcgcagcgtgggttgaagggaatttccgccctacgcaaaggcgcacta
attgaggccatcaagaatggctcagttccgcagaaagccaaggatgaagctgaaaaggct
gcaaagaagcagtcagctgatgccaacgccgctgaagggtcagaatcttctgataactcg
gccgcctccggccggaagcgccgggctacccgcagcgttttaggtggggacagcccacgc
cgtgcggttcgacgcaactctgagcagctcgacgctgacaataatcacgatgcttcgaag
gaagacgcccaagagtccaaggattcctcctcgcgttctagggataactccgacaccgaa
gagaattttgagacccgctcgcaggcacgccgggcgcgccgcaaccgcaaccgccgggac
aaccagggtgatggcaacagcgctgatgaccgccgctctggagattccgctgacaaggaa
gcattttcgaaagaaaaagaagacgacaagggcgcgaatagcggctctaacaccggggat
tctcagaacgattccggcagctccgacaactcggataagcgcggtagtggcgaggatgac
agcaacaaccgcggccgtggccgccggggggaccgcaacaaccgtgaccgcaacaacaac
cgcgggcgcaatggcaacaacggtaaccatgccaacaacggcaataacaacgatgataac
tccggtgatgacaatgattccggagataacaacaaccgggacaacaatcgcggcgggcgc
agcaacgaccggggcgaccgtaatgaccggggcgaccggaacgaccgcgggggccgcaac
ggccgccgggggcgccgcaaccgccgtaatgagggtggcagcggcaacggcaacggcaac
tcccgtggcaacggcaacaataacgacctgcagatccgcgagggtgacgagacccaggca
gtgggcggcatcctcgaagtagtggacaacaacgtggctttcctgcggaccaccggctac
cacgccggcgcgtccgacgtttttgtcaacaacaacctagtgcgccgcttgaacctgcgt
tccggtgacgctgtaactggactggtcaaggtgggcggcaacacccacaccgtgggcaat
ggacgtaaccgccgcaagtacaaccagctggcccaggtagattccgtgaacgggttggag
cccgcagccgcctcacagcgcccgaagttctcccagctcacgcctttgtaccccaaccag
cgcctgcgcctggagacggaccaaaagatcctcaccacccgcgttatcgacctgattatg
cctattggcaagggccagcgcgcacttatcgtgtccccgccaaaggcaggtaagaccacg
atcatgaagtcgatcgctaatgccatttccaccaacaaccccgagtgctacctcatggtt
gtcctggttgatgagcggcccgaggaagtcactgacatgcagcgttccgtcaagggtgag
gttattgcctctaccttcgaccgcccgccgtcagagcacaccgctgtggcggaactggcc
attgagcgcgcaaagcgcctggtggagcagggcaaagacgtagtggtcctgctggactcc
atcacccgcctggggcgcgcgtacaacaactcttccccggcgtctggacgaatcctgtcc
ggtggcgtggactccaacgcgctatatccaccaaagcgtttcctaggcgctgcccgcaat
atcgaagacggcggctcgctgaccatcattgctactgccatggtggagaccggttccacc
ggtgacaccgttatcttcgaagagttcaagggcaccggcaacgcggaactgaaacttgac
cgccacatctccgagcgtcggatcttcccggccgtggacgtcaacccttctggtacccgc
aaggacgagctgctcctggttcctgaagaggctcgtatcatgaccaagctgcgccgtatc
ctggctggcctggattcctttgccgccattgatttgctcatcaagcagctgaagaagacc
aagtccaatggtgagttcctcatgcaggttgcaagctctgcacccatggtggccaacacc
gaggaggaggactactcctaa
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