Corynebacterium phocae: CPHO_07725
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Entry
CPHO_07725 CDS
T05007
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPHO_07725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpho03019
]
CPHO_07725
03009 Ribosome biogenesis [BR:
cpho03009
]
CPHO_07725
Enzymes [BR:
cpho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CPHO_07725
Messenger RNA biogenesis [BR:
cpho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPHO_07725
Ribosome biogenesis [BR:
cpho03009
]
Prokaryotic type
rRNA helicases
CPHO_07725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
adh_short
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
APT92797
UniProt:
A0A1L7D3Z8
LinkDB
All DBs
Position
complement(1730091..1732187)
Genome browser
AA seq
698 aa
AA seq
DB search
MSITDNVNGDENKPEENFTQSESQENSQGSEAQEASQVNENDTRAAATSEDTDAESKDSA
NDTQGFASLGLPVEVQKAVTKIGFTEPSPIQAQTIPVLMEGRDVVGLAQTGTGKTAAFAL
PVLSKIDPKKRHPQALVLAPTRELALQVADAIQSFADHLGRIEVLPIYGGQAYGIQLSGL
RRGAQIIVGTPGRVIDHLEKGSLDISQLEYLVLDEADEMLNMGFQEDVERILADTPEEKQ
VALFSATMPNAIRRLSKQYLNNPAEITVKSETRTNDNITQRFLLTAHRQKMDAFTRILEV
IEYDAIIVFCRTKHETEDVATNLKSAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVAT
DVAARGLDVDRITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIER
VTNARLEEMDLPSIDEVNAKRKERFAASIGESMDDSQMEMFRGMLRKYSETHNVAMDDIA
AALAVKLQGGNDFLLKDMPQFKKRERFDRDERGGRNDRFGGDRGGRDRGGRNDRGGRDRD
REHRSDADFDTYRLDVGKRQNVRPGAIVGALANEGGLTAKDFGRITIAIGHTLVDLPKNL
DASVLSRLKDTRISGQLINIAKDTGRPARDGDRDDRGGRGGFGGRGGRDRDDRGGRGGFG
GRGGRDRDDRGGRGGFGGRGGRDRDDRGGRGGRGGWRD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgttaacggcgacgaaaataagccggaagaaaactttacacag
tcggaatctcaggaaaactcgcaaggtagtgaggctcaagaagcttcacaggtcaatgaa
aatgacaccagggctgcggcaacttctgaggacaccgacgctgaatctaaggattcagcc
aatgatacccaggggtttgcaagccttggtctgcccgtagaggtacaaaaggcagtaacc
aagattggtttcaccgagccttcaccgatccaggcgcagaccatccccgtcttgatggaa
ggccgcgacgtcgtgggcctagcccagactggtactggcaagaccgcagctttcgcgctg
ccggttctgtccaagatagatcccaaaaagcgtcacccacaagcattggtgcttgcacct
acccgtgagctagccctgcaggtagcagacgctattcagtccttcgccgaccatcttggc
cggattgaagttctgcctatctacggcggtcaggcctacggcatccagctttccggtttg
cgccgtggtgcgcagatcatcgttggtaccccgggccgcgtcattgaccacttggaaaag
ggttccctggatatttcccagctggagtacctggttctggatgaagcagatgaaatgctg
aacatgggcttccaagaagacgttgagcgcatcctggcagacaccccggaagagaagcag
gtcgcactgttctccgccaccatgcctaacgccatccgtcgcttgtcgaagcagtatctc
aacaaccccgctgagatcactgtcaagtctgagactcgtacgaatgacaacatcacccag
cgtttcctcctgactgctcaccgccagaagatggacgcgttcacccgcatccttgaggtt
attgaatacgacgcaatcatcgtgttctgtcgcaccaagcatgaaaccgaagacgtagcc
accaacctcaagtccgccggctacaacgccgcagctatcaatggtgatatcgctcagcaa
cagcgtgagcgcaccgttgaccagctcaaggatggccgcctggatatcctggttgctacc
gacgtggctgcccgtggcttggacgtggaccgtatcactcacgtggttaactacgacatt
cctaatgacactgagtcctacgtgcaccgtattggccgtaccggccgcgcgggccgcacg
ggcgaggcaatcttgtttgtcaccccgcgtgagcgccgtatgctgcgttccatcgagcgt
gttaccaacgcgcgtctcgaagagatggacctgccaagcattgacgaggtaaacgcaaaa
cgcaaagagcgctttgcagcctccatcggtgagtccatggacgactcgcagatggaaatg
ttccgtggaatgctgcgcaagtactccgaaacccacaacgtggctatggacgatattgcg
gcggcacttgcggttaaactgcagggtggcaatgacttccttctcaaagacatgcctcag
ttcaagaagcgcgagcgctttgaccgtgacgaacgcggtggacgcaacgaccgctttggt
ggcgaccgtggcggacgtgaccgtggtggacgcaacgaccgcggcgggcgtgaccgtgac
cgcgaacaccgttccgacgctgactttgatacctaccgcttggatgttggcaagcgccag
aacgtgcgccccggcgctatcgttggtgcccttgccaacgaaggtggcctgaccgccaag
gacttcggtcgcattactattgcgattggacacaccctggtggatcttcctaagaacctg
gatgcttcagtgctttcccgtctgaaggacacccggatttctgggcagctcatcaacatc
gctaaggacaccggtcgccccgcacgcgacggcgaccgtgatgatcgtggcggacgtggc
ggctttggtggccgtggcgggcgtgaccgtgatgatcgtggcggacgtggcggctttggt
ggccgtggcgggcgtgaccgtgatgatcgcggtggacgtggcggctttggtggccgtggc
gggcgtgaccgtgatgaccgtggcggacgcggcggccgtggtggctggcgcgactaa
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