KEGG   Corynebacterium phocae: CPHO_08895
Entry
CPHO_08895        CDS       T05007                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpho  Corynebacterium phocae
Pathway
cpho03420  Nucleotide excision repair
cpho03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CPHO_08895
   03430 Mismatch repair
    CPHO_08895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpho03400]
    CPHO_08895
Enzymes [BR:cpho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CPHO_08895
DNA repair and recombination proteins [BR:cpho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPHO_08895
   MMR (mismatch excision repair)
    Other MMR factors
     CPHO_08895
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 ResIII DEAD OstA_2
Other DBs
NCBI-ProteinID: APT92986
UniProt: A0A1L7D484
LinkDB
Position
complement(1957709..1960276)
AA seq 855 aa
MENSSPFSRRNPSTPATGTEPTGREQGFLFGGAKPAPVPAEQPAPAVDSPLLEGLNPQQR
QAVEHIGSPLLIVAGAGSGKTAVLTRRIAYLMQHRGVAPWEVLAITFTNKAAAEMKERVG
QLVGPVAERMWVSTFHSICVRILRQNAQLVPGLNSNFTIYDADDARRLCSLIAKDMGLDL
KKFTSRVLANNISNYKNELQGPDYVLAEAERTHNPFDLTIAQVYAEYQRRLRAANAVDFD
DLIGEVVRIFTQYQQVVEFYRRRFKHVLIDEYQDTNHAQYRLVAALVGQGNRVAEGMAPE
LCVVGDSDQSIYAFRGATIRNIEEFERDYPQARTILLEQNYRSTQTILNAANAVIAKNDN
RRKKNLWTAHGQGAKIVGYVSDNEHDEARFIAQEVDQLVDGGREYSDMAVMYRTNNSSRA
IEDIFIRSGIPYKVVGGTRFYERKEIRDLVAYLRIVFNPDDTISLRRIINVPKRGIGAKA
EGHLAVYAENMGIGYSQALRDAAAGDIPGLSAMGRNAMARFVEMMDSVRAQMPAMTNEIT
GQPDIGELVTTILDATGYRALLESSNDPQDGSRLDNLNELVSVAREFSSEAANQMAFAEA
DAELGGEGGASMEEGEAAPGSLQAFLEKVSLVADADQIPEHESGVVTLMTLHTAKGLEFP
VVFLPGWEDGQFPHMRSLGDPLELSEERRLAYVGITRAREQLYLTRALLRSSWGNPLSNP
ASRFLAEIPEDLIDWRRGEQDSSLSRASAWGDDDYSYGRTYNKEWGGYGGKSTGSASSPT
QARKPSTSSRSQLSARPRNNKLDLVVGDRVNHDKYGLGKVLEVSGTGPRTSATIDFGSAG
KVRLMLIGGVPMEKL
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggaaaattcctcaccgttttcacgccgcaacccgtctacgcccgccaccggaactgaa
cccactggtagggagcaaggcttcctctttgggggagccaaacccgcgccggtgcccgca
gagcaaccggcacctgccgtggacagcccgctgttggaggggctgaacccccagcagcgg
caggcggtggagcatattggctccccgctgctcatcgtggccggcgctggatcgggcaag
accgcggtgctaacccggcggattgcctacctcatgcagcaccggggggtggcaccctgg
gaagtactggcaattacgtttaccaacaaggccgcagcggagatgaaagagcgcgtgggc
cagctggtggggccagtggcggagcgcatgtgggtatccaccttccactccatctgcgtg
cgtatcttgcgccaaaacgcgcaactggtgccggggctaaactccaacttcaccatttat
gacgcggatgatgcccggcggctgtgctcgctgattgctaaagacatgggcttggacctg
aaaaagttcaccagccgcgtgttggccaacaacatctccaactacaaaaacgagctccaa
gggccggactacgtgctggcagaagcagaacgcacccacaaccccttcgacttgaccatc
gcgcaggtctacgccgaataccagcggcgcctccgcgccgccaacgccgtggattttgac
gacctgataggggaggtcgtgcgcatcttcacccagtaccagcaagtagtggagttctac
cggcggcggttcaagcacgtgctcattgatgagtaccaagacaccaaccacgcgcagtac
cgcctggtggcggcgctggtgggccaaggcaaccgggtagcggaaggcatggccccggag
ctgtgcgtggtgggtgactcggaccagtccatctacgccttccgtggcgccaccatccgc
aacattgaggaatttgagcgcgactacccgcaggcgcgcaccattttgctggagcaaaac
taccgctccacccaaaccatcttgaacgcggccaacgcggtgattgcgaaaaacgacaac
cgccgcaagaagaacctgtggacagcacacggtcagggcgcaaagattgtcggttacgtc
tcagacaatgagcacgacgaagcccggtttattgcccaagaagttgaccaactggtagac
gggggccgggagtattccgatatggcggtgatgtaccggaccaataactcttcccgcgcc
attgaagatatcttcatccgctctggcattccctacaaagtggtgggcggcacacgcttt
tatgagcgcaaagaaatccgcgacctggtggcctacctgcgcattgtgttcaacccagat
gacaccatcagcctgcggaggataatcaacgtgcccaagcgcggtatcggcgcgaaggca
gaaggccacctggcggtctacgcggagaacatgggtattggctactcccaggcgctgcgt
gacgcggccgcgggggatatcccggggcttagtgctatggggcgcaatgccatggccagg
ttcgtggagatgatggactcggtgcgcgcgcagatgccggctatgaccaatgagatcacc
gggcaaccagacatcggggagctggtcaccacaatcttggacgctaccggctaccgcgca
ctgctggaaagctcgaatgacccgcaggacggctcgcgcttggacaacctcaacgagttg
gtttccgtggcgcgggaattcagctcagaggcagccaaccagatggcgttcgcggaggcg
gacgcggagctaggcggtgaaggcggcgcgagcatggaagaaggagaagccgcgccgggc
tccttgcaggcctttttagaaaaggtttccttagtagcggacgcggaccaaattccggag
cacgaatccggggtggtcacactgatgacgttgcacacggccaagggtctggaatttccc
gtggtctttcttccggggtgggaagacgggcagtttccgcatatgcgctccttgggggat
ccgctggagctgtcagaggagcgccgcttggcctacgtggggatcaccagagcgcgcgag
caactgtatcttactcgcgcgcttctccggtcatcctggggtaatccgttgtccaatccg
gccagtcgcttcctcgcggagatcccagaagatctcatcgactggcgccgtggagaacaa
gatagttccctgtcccgggcctcggcctggggtgatgatgattattcctatggccgcacc
tataacaaggagtggggcggctacggcggaaagtctacgggctccgcgtcttccccaacg
caggcccgtaaaccttccacttcctcgcgctcgcaactctcagcgcggccacggaataat
aaacttgatttagttgtaggagaccgcgtcaaccatgacaaatacggattaggtaaggtc
ctggaggtaagcggtactggtcctcgtaccagcgcaaccattgattttggttccgcaggc
aaggtccggctcatgctcattggcggcgttcccatggaaaagctctaa

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