Corynebacterium phocae: CPHO_09440
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Entry
CPHO_09440 CDS
T05007
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03420
Nucleotide excision repair
cpho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPHO_09440
03430 Mismatch repair
CPHO_09440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpho03400
]
CPHO_09440
Enzymes [BR:
cpho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPHO_09440
DNA repair and recombination proteins [BR:
cpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPHO_09440
MMR (mismatch excision repair)
Other MMR factors
CPHO_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
DNA_pol_A
Motif
Other DBs
NCBI-ProteinID:
APT93071
UniProt:
A0A1L7D4V4
LinkDB
All DBs
Position
complement(2080061..2083246)
Genome browser
AA seq
1061 aa
AA seq
DB search
MFSPNQLANALGKKFGPTPEQAKVIEGQLGPKLVVAGAGAGKTETMASRVVYLVANGLVR
PEQVLGLTFTRKAAQQLEQRIRSQLLTLKGSRLITPGSPAWEALENVAVNVSTYDSYAGD
LVREYGLLLPVEPSSRLITAAEQYAIADEVVRNYDGELTATNNVDKIVQTVSKLSASMDN
ELTDPASIAEHEREFRTELASLEKTRANGPEYSQDLQKYLDLQKLRVQFLPLLSALAERQ
RELGVKTFGQQMAAAAKLAAQHPEVGKSQRARYRVVMLDEYQDTSHSQRVLLRALFGGGY
HEGISVTAVGDPMQAIYGWRGATTENLASFVEDFPQANGEPAPKDQLTTSWRNPPNVLGL
ANRVADKVFGGNPRPVDPLSARPGANPGEIKLAYFATAGQECEFVAQHLAGKFRESQDKG
QPFSAAVLVRANKHAPEIARALDAAGVPNEIVGLGGLLLKPEVQDLLALATMLVKPQDAA
AALRILTGPIVGLGIDDLMALHERVRNLQGASGGRVLPDPDQDPVEYLQEELHALAEEGA
DFSPGLGDAVADLGEPDRYSPEGLARIRTLASKLRGLRTHSLSKSLNDIFADIEEEFGIR
TEALANPSGAGTAHLDQFADIVAGYPGSGLAGLIDYLQLAREQEDGLAPGEVVSREDRVM
IMTAHKAKGLEFGHVCVLHADSTTYNAKAETFLTKLEKVPGDQDVIDAADAVKRSDFNNA
CKAFIAESREHQAEESARLFYVAITRTEESLTVTGSGTNNARGKSKKGPYELLETLRAAY
PDLVVHWEVPEAPVPEQDQEAISAVFPALAPTPEIRRGADVVLAALNETPEPVAGELFEL
WERDATALIEEWNNRETPVVDVELPAELTASDMVALSTDREEFAKRKRRPVPFKPNSFAK
RGTAFHAWVEEFFHGESLLSEDELPGMGEVASAEQLEVLREKFAQSSWAQRTPYAVEAPF
EVSIGSVVVRGRMDAVFQEPDGSFMVVDWKTGRRPTGRDMDNAAIQLAVYAQAWQRTSGT
DQPVRAAFYYVEEDFTFIPEHLPDRAELEEILKFPKTTAKG
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcccaaatcaactagccaacgccctggggaagaagtttggccccaccccggaa
caagccaaagtcattgaggggcaactgggccccaaactggtggtggccggggcaggtgcc
ggaaagaccgaaaccatggcctcgcgcgtggtctacctggtagctaacgggctggttcgc
ccggagcaggtcctgggattgacgtttacgcgcaaggccgcgcagcagctggagcagcgt
atccgcagccagctgctcactttgaaaggctcgcggctgattacccccggctcgccggcg
tgggaggccttggaaaacgtggcggttaacgtctccacctatgattcctacgctggagac
ttggtccgcgaatacggcctgttgttgccggtggagccctcttcccggttgattacggcg
gccgagcaatacgctatcgctgacgaggtggtccgcaactacgacggagagctcaccgct
accaacaacgtggataagatagtccagaccgtgagcaagctctccgcctcgatggacaat
gagctcaccgatcccgccagcattgctgagcatgaacgggaattccgcacggaattggcc
agcctggaaaaaacgcgcgccaacggcccggagtattcccaggacctgcaaaagtacttg
gatctacaaaagctgcgggtacagttcctgccgctgctttctgccctggcggagcgccaa
cgtgagttgggggtgaaaacctttggtcaacagatggcggcggcggccaagctggcggcc
cagcacccggaggtgggcaagtcccagcgggcgcggtaccgggtagtgatgctcgacgaa
taccaggatacttcgcattcccagcgcgtcctgctgcgggctttgtttggcggcggctac
cacgagggaatttcggtgaccgcagtaggcgacccaatgcaggccatctacggctggcgc
ggtgccaccaccgaaaacctggcgtcctttgtggaggactttccgcaggctaacggcgaa
cccgcccccaaagaccagctgaccacctcctggcgcaacccgccaaacgtcctaggtttg
gccaacagagtcgctgacaaggtgtttgggggaaatccgcgcccggtagatccgctttcc
gcgcggcccggggcgaatcccggcgaaattaagctggcgtattttgccacggccggccag
gaatgcgaattcgtggcgcagcacctggcaggaaagttccgggagtcccaagacaagggt
caacccttcagcgctgcggtgctagtccgggcaaacaaacacgcgccggaaatcgcccgg
gcgctggacgccgccggggtgcccaatgagatagttggcctgggcgggctgttgctaaaa
cccgaggttcaagaccttctggcactggccaccatgctggtcaagccccaagacgcggca
gcggcgctgcgtattctcaccggccccatcgtgggcctaggaattgacgacctcatggct
ttgcacgagcgcgtgcgcaacctacaaggggcaagcggggggcgcgttcttcccgacccg
gaccaggacccggttgaatacctgcaggaggaactgcacgcgctggccgaggagggcgct
gattttagtcccggattaggcgacgccgtggcggacttgggagagccggaccgctacagc
ccagagggcctggcgcgaatccggaccctggcctcgaaactgcgcggactgcgcactcac
tccttgtctaaatccctcaacgacatatttgcggacattgaggaagagtttgggatccgc
accgaggccctggctaatccctccggggccggcaccgcacacctggaccagtttgcggac
atcgtggcaggatacccgggatccgggttggcgggtcttattgactacttgcagctggct
cgagaacaagaagatggcctggccccgggtgaggtagtttcccgcgaagaccgcgtgatg
attatgaccgcgcacaaggccaaaggcctggagtttggccacgtgtgcgtgctgcacgcg
gattccaccacctataacgctaaagctgagacctttttaaccaagctggaaaaggtgccc
ggtgaccaggacgtgattgacgccgcagacgccgtcaagcgctccgatttcaataacgcc
tgcaaggccttcatcgcggaaagccgggaacaccaggcggaggaatccgcgcgcctgttt
tacgtagcaatcacccgcacggaagaatccctgaccgtcaccggatccgggactaataat
gcccgcggaaagtcgaagaagggcccctatgagctgttagagacactgcgggcggcgtac
cccgacctggtggtgcactgggaagtgccggaagcacccgtcccggaacaagaccaagag
gccatcagtgccgtgttccccgcgcttgcgcccaccccggagattcgccgtggcgccgat
gtcgtcctggccgcactcaacgaaactccagaacccgtagcgggagagctgtttgagctg
tgggaacgcgacgccacggcgctcatcgaggaatggaataatcgcgagaccccggtggtg
gacgtggagctgccggctgagcttaccgcctctgacatggtggcgctttccaccgacagg
gaggagtttgccaagcgcaagcggcgccccgtgccctttaagccgaatagctttgccaag
cgcggaactgccttccacgcttgggtggaggagtttttccacggcgagtcgttgctgtct
gaggacgaattgccgggcatgggcgaggtggcatcggcggaacagctggaagtgctgcgg
gagaagtttgcccagtccagctgggcccagcgcactccctacgccgtcgaggcgcccttc
gaggtctccataggctccgtggtggtgcgtgggcggatggacgcggtgttccaggaaccg
gatggctcgttcatggtggtggactggaagactgggcggcggcccaccggccgtgacatg
gacaacgcagccatccagctggccgtctacgcgcaggcgtggcagcgcactagcggcaca
gaccagcccgtgcgcgcagctttttactacgtggaggaggatttcaccttcattccggag
caccttccggaccgtgcagagctagaggagatactaaagttcccaaaaaccacggcaaag
ggctaa
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