Corynebacterium phocae: CPHO_10290
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Entry
CPHO_10290 CDS
T05007
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPHO_10290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpho03021
]
CPHO_10290
03400 DNA repair and recombination proteins [BR:
cpho03400
]
CPHO_10290
Enzymes [BR:
cpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPHO_10290
Transcription machinery [BR:
cpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPHO_10290
DNA repair and recombination proteins [BR:
cpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPHO_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
APT93213
UniProt:
A0A1L7D5D8
LinkDB
All DBs
Position
complement(2264145..2265155)
Genome browser
AA seq
336 aa
AA seq
DB search
MLISQRPKLTEEVIDEARSKFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTVSGVKEDVSEIILNIKGLVLSSDSDEPVVMYLSKQGAGVITGADIQPPAGVEIHN
PDLHIATLNDDAKLEMELIVERGRGYVPAAPTSGEIGRIPVDQIYSPVLKVSYKVEATRV
EQRTDFDKLVIDVETKNSISARDALASAGGTLVELFGLARELNTAAEGIEIGPSPQETEY
IAAYSTPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKLNN
LGLSLKGTPEDFDPTQLEGYDAETGDFKDPSADESE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcccagcgtcctaagctcaccgaagaagttatcgatgaagcgcggtccaag
ttcaccattgaacctttggagcccggctttggatacacccttggtaactcactgcgccgc
accctgctgtcgtccatcccgggcgcagcggtaacgtcaatcaagattgacggcgtcctg
catgagttcaccaccgtctccggtgtgaaagaagatgtttctgaaatcatcttgaacatc
aagggcttggtactttcttctgactctgatgagccagtagtgatgtacctcagcaagcaa
ggcgcaggtgttatcaccggcgctgacatccagccaccggctggcgtggagatccacaac
ccggatctgcacattgctaccttgaatgatgatgccaagctggaaatggaactcatcgtt
gagcgtggccgcggctacgttccagcagcacctacctctggtgagattggccgcattcct
gtggaccagatttactccccagtgctcaaggtgtcctacaaagttgaggctactcgtgtt
gagcagcgcaccgactttgacaagctggtcattgacgttgagaccaaaaactcaatttcc
gcccgtgatgccctggcttccgccggtggcaccctggttgaactctttggccttgcccgt
gagctcaacactgctgcagaaggcattgaaattggcccctccccacaggagaccgaatac
attgctgcctacagcacgccaattgaggatctgaacttctccgtacgctcgtacaactgc
ctgaagcgtcaggaaatccacaccgtcggtgagctcgctgagtgcaccgagtcggatttg
ctggatatccgcaactttggtcagaagtcgatcaatgaggtaaagatcaagctcaacaac
ttgggcctgagcctcaagggcactcctgaggactttgacccaacgcagcttgagggttac
gacgcagaaaccggtgacttcaaggatccgtctgcggacgagtccgagtaa
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