Corynebacterium phocae: CPHO_10655
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Entry
CPHO_10655 CDS
T05007
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPHO_10655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpho03021
]
CPHO_10655
03400 DNA repair and recombination proteins [BR:
cpho03400
]
CPHO_10655
Enzymes [BR:
cpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPHO_10655
Transcription machinery [BR:
cpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPHO_10655
DNA repair and recombination proteins [BR:
cpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPHO_10655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APT93276
UniProt:
A0A1L7D525
LinkDB
All DBs
Position
complement(2340554..2344564)
Genome browser
AA seq
1336 aa
AA seq
DB search
MFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITHVDEEARHNDQSTLEAEMLLEKKDVEDDVNSDIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREIARLDEIWSTFLKLTPKQMIIDENI
YEELVDRYEDYFQGGMGAEAIQTLIRNFDLEAEAEILKEIINSGKGQKKVRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGSRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGPDEIGGN
GRYTPATEDKPATGVFSSYAEAIMAWDRGMVGLQAPIKVRISHLRPPAEIEAEQFPDGWQ
KGQPWLADTTLGRIMFNDLLPWNYPYLEGVMLRKGGKSNAVLLGDVINDLAIKYPMITVA
QVLDKMKDAGFYWATRSGVTISMDDVLVLPNKEEVLESYEKEATRIERKFWEQGALTERE
RYDRLVELWKDATDTVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSHG
EYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCNTRQGVLIHIGQAKSGTEGGKGNLVQHELWETTASGRVVASDTKDVDGNVVLSAGDDL
TEDNTQKLLDAGLAEVKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTISLSDEGNFWTL
TITPDDGSDNIEYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVTTGERLMRGAADP
HDVLEVLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIEAGSTDFLPG
TLVDLSEAKQVNAKQVAEKGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDQLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGF
GEFTGASVPLDEDFSF
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcggcctcgctaccgctgaagacatc
cgtcgttggtccaagggtgaggttaaaaagccggaaaccatcaactaccgtactttgaag
cctgagaaggacggcctgttctgcgagcgcatctttggccctacccgtgactgggagtgc
cagtgtggcaagtacaagcgcgttcgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtctaaggttcgccgcgagcgcatgggccacattgagctggccgcgccc
gttacccacatctggtacttcaagggtgttccttcccgtttgggttaccttttggacctg
gctccaaaagacctcgagcgcatcatctactttgctgccaacatcatcacgcacgttgat
gaggaggcgcgccacaatgaccagtccactctggaagcagaaatgctgctggaaaagaag
gacgttgaggatgacgttaactcggacatcgcggagcgcgccgccaagctggagcaggat
ctagctgagctagaggctgccggtgctaaggctgacgcccgccgcaaggttcaaaacgcc
gctgataaggagatgcagcacatccgtgagcgcggcgagcgcgagatcgcccgcctggat
gaaatctggagcaccttcctgaagctgactccgaagcagatgatcattgatgaaaacatc
tacgaggagctagttgaccgctacgaggactacttccagggcggcatgggtgcagaggct
atccagacgctcatccggaactttgaccttgaagctgaagcagagattctcaaggaaatc
atcaacagcggtaagggccagaagaaggtccgtgcgctcaagcgcctaaaggttgttgct
gcgttcttgcgttccggcaacgacccagcgggtatggtcttggacgctattccggtcatc
ccgccggagctgcgccccatggtgcagctggacggtggccgctttgccacctccgacctg
aatgacctctaccgtcgtgtgatcaaccgtaacaaccgtttgaagcgcatgattgatctg
ggcgccccagagatcatcgtcaacaacgaaaagcgcatgctgcaggaatctgtcgatgcc
ctctttgacaacggccgccgtggccgcccggttaccgggccaggctcacgtccgctgaag
tctctgtctgacttgctcaagggcaagcagggccgtttccgtcagaacttgctgggtaag
cgcgttgactactccggccgttcggttattatcgtcggcccgcagctcaaactgcacgag
tgtggtctgcctaagctcatggcgctggagctgtttaagcccttcgttatgaagcgtctg
gtggaaaatgactacgcccaaaacatcaagtccgccaagcgcatggtggaacgccagcgc
ccagaggtctgggacgttttggaagaagccatttcggagcacccagtgctgcttaaccgc
gcacctacgctgcaccgccttggtatccaggccttcgagcccaagctggtggagggtaag
gctatccagctgcacccgctagcttgtgaggctttcaacgctgacttcgacggcgaccag
atggcagttcacctgccgctgtccgcagaagctcaggctgaggcacgcgtgctcatgctt
gcttccaacaacattttgtcgcctgcgtccggtaagcctttggctatgccgcgtctggac
atggttactggtctttactacctgaccatggacaagggacctgatgagattggtggcaat
ggccgctacaccccagcgaccgaggacaagccagccactggtgtgttctcttcctacgct
gaggccatcatggcttgggaccgcggcatggttggtctgcaggcccccatcaaggtgcgt
atctctcacctgcgcccaccggctgagattgaggctgagcagttccccgacggttggcag
aagggtcagccttggctggctgacaccaccttgggccgtatcatgttcaacgacttgctg
ccgtggaactacccataccttgagggcgtcatgctccgcaagggtggcaagtccaacgcg
gtgctgcttggtgatgtcattaatgacctagccatcaagtacccgatgattactgtggct
caggttctggacaagatgaaggatgccggtttctactgggcaacccgctccggtgtgacc
atctctatggacgacgtgctggttcttcccaacaaggaagaagttctggagtcctacgag
aaggaagccacccgcattgagcgtaagttctgggagcagggtgcgcttactgagcgtgag
cgttacgaccgcctggttgagctgtggaaggacgccacggacaccgtgggtaaggccgtt
gaggacctgtacccggacgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactcgcacggc
gagtacatcacccgtcctattaagacctccttccgtgagggcttgtccgttctggagtac
ttcaacaactcgcacggctcccgtaagggtctggccgataccgctttgcgtaccgctgac
tccggttacctcacccgccgtttggtggacgtggcccaggacgttattgtccgcgaagag
gattgcaacacccgccaaggtgtacttatccacatcggtcaggctaagtccggcaccgaa
ggtgggaagggcaacctggttcagcacgaactgtgggagaccaccgcttctggccgtgtc
gttgcatccgacaccaaggatgttgatggaaacgttgtccttagtgcgggcgatgacctg
actgaagacaatacccagaaactgcttgatgctgggctcgctgaggtcaaggttcgctcc
gtgctgacctgccagaccccagccggcgtgtgtgctaagtgctatggcaagtccatggct
tccggccagctggttgacatcggtgaggcagtgggcattgtggcagcacagtccattggt
gagccgggtacccagctgaccatgcgtacgttccaccagggtggtgttggtggcgacatt
accggcggccttccgcgtgtgcaggaactctttgaggctcgtaacccgaagaaccgtgca
ccgattgcttccgttgacggcaccatctccctgtctgatgagggtaacttctggaccctg
accatcactcctgatgatggctctgacaacatcgagtatgagaagctgtctaagcgccag
ggcctggcccaggttcgccgcccaatggagtccaatccggatgccatgattgagcgttcc
ttgcgtgatggtgaccacgtcaccaccggcgagcgtctcatgcgtggtgctgctgacccg
cacgatgttctggaagttctgggccgtcgtggcgtggaaaagcaccttattgatgaggtt
caggccgtctaccgtgcacagggcgtggctatccacgataagcacattgagatcatcatt
cgccagatgctgcgtcgcggtaccgtcattgaggccggttctaccgatttcttgccgggc
accttggttgacctttctgaggccaagcaggttaacgctaagcaggttgcggaaaagggc
gagccagctcagctgcgctcggagatcatgggtattaccaaggcttccttggctacggag
tcgtggctgtccgccgcctccttccaggagaccacccgcgttcttaccgacgccgctatc
aataagcgctccgatcagctcatcggtctgaaggagaacgtgattatcggtaagctgatt
ccagctggtaccggtatctcccgttaccgcaacatctccgtcaagccaactgaggccgct
cggaatgctgcgtactccatccccacctacggtgattccatctacggtgatgatggcttt
ggtgagttcaccggcgcctccgtgcctttggacgaggacttctccttctag
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