Cnuibacter physcomitrellae: B5808_04595
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Entry
B5808_04595 CDS
T04797
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5808_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cphy03021
]
B5808_04595
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_04595
Enzymes [BR:
cphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5808_04595
Transcription machinery [BR:
cphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5808_04595
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5808_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ARJ04581
UniProt:
A0A1X9LKX0
LinkDB
All DBs
Position
987212..990700
Genome browser
AA seq
1162 aa
AA seq
DB search
MAAARNATTNSPKNGRAHSRLSFAKITDTLTVPDLLALQTESFDWLVGNDAWKARVEEAK
QAGRQDLPNRSGLDEIFEEISPIEDLGETMQLSFTSPFLEPEKYSIEECKERGKTYAAPL
YVEAEFMNHQTGEIKTQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPGVYFERAQEK
TSDKDIYSARIIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGMTSEEILEEFK
GFASIESTLEKDAILTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGR
YKIDRKLGLDAPLTDSVLTVADIVATIKYLVALHDNQTTLPGVRDGQPVTLRLDVDDIDH
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASFARINSFGFIETPYRRVENGRVTEHIDYLTASEEDDFIVAQANAPLTADL
HFAEDRVLARRKGGEVDLFPRDEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQ
RQAVPLLRSESPFVGTGMEGFAAIDAGDVVIANNAGVVQEVSADVVSVLLDEGGTEEYYL
RKFDRSNQGTSYNHRVVVSEGERVEKGEVIADGPATENGELALGKNLLVAFMPWEGHNYE
DAIILSQNLVKDDVLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLADLDERGIIRI
GAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEEGTIIAVKE
FSAENDDELGSGVNQRVVVYIAQKRKITAGDKLAGRHGNKGVISKILPVEDMPFLADGTP
VDVVLNPLGIPGRMNFGQVLETHLGWIAKQGWEVDGKPKWAARLPEQARSAEPGTKVATP
VFDGASEEEIAGLLDSTIPNRDGERLIDSSGKTRLFDGRSGEPYPYPVSVGYMYILKLHH
LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
ILGRVKVYEAIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGTAVSLRDTDDEVF
RAAEELGINISSRFESSSIDDI
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaacgcaaccaccaactcacccaagaacggtcgggcccactcccgc
ctttctttcgccaagatcacggacacgctcaccgtccctgacctgctcgcccttcagacc
gagagcttcgactggctcgtcggcaacgacgcgtggaaggcacgcgtcgaggaggccaag
caggcgggccgacaggacctcccgaaccgcagcggtctcgacgagatcttcgaggagatc
tcgcccatcgaagacctcggcgagaccatgcagctcagcttcaccagcccgttcctcgag
ccggagaagtactcgatcgaggagtgcaaggagcgcggcaagacctacgccgcgccgctg
tacgtcgaggccgagttcatgaaccaccagaccggtgagatcaagacccagacggtcttc
atgggcgacttcccgctcatgaccgagaagggcacgttcatcatcaacggcaccgagcgt
gtcgtcgtgtcgcagctcgtgcgctctcccggcgtctacttcgagcgcgcccaggagaag
acctccgacaaggacatctactccgcgcgcatcatcccgagccgcggtgcgtggctcgag
ttcgagatcgacaagcgcgaccaggtcggcgtccgcatcgaccgcaagcgcaagcagtcg
gtcacggtgttcctcaaggccctcggcatgaccagcgaggagatcctcgaggagttcaag
ggcttcgcgtcgatcgagtcgaccctcgagaaggacgccatcctcaccaaggaggaggcg
ctgaaggacatctaccgcaagctccgtccgggcgagcaggtcgccgccgaggccgcgcgt
gcgctcctcgacaacttctacttcaacccgaagcgctacgacctcgcgaaggtcggccgc
tacaagatcgaccgcaagctcggcctcgacgcgccgctcaccgactcggtgctcaccgtc
gccgacatcgtggccacgatcaagtacctggtcgccctgcacgacaaccagaccaccctc
ccgggtgtgcgtgacggccagcccgtcacgctgcgtctcgacgtcgacgacatcgaccac
ttcggcaaccgccgcatccgcgcggtgggcgagctcatccagaaccaggtccgcaccggt
ctgtcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgaggcgatc
accccgcagaccctgatcaacgtgcgtcccgtcgtggccgcgatcaaggagttcttcggc
acctcgcagctcagccagttcatggaccagaacaacccgctcgcgggcctgacccacaag
cgccgcctgtcggcgctgggccccggtggtctgtcccgtgagcgcgccggcgtcgaggtc
cgcgacgtccacccgtcgcactacggccgcatgtgcccgatcgagacccccgagggtccg
aacatcggtctgatcggttcgctcgcctcgttcgcgcgcatcaactcgttcggcttcatc
gagacgccgtaccgtcgcgtcgagaacggccgggtcaccgagcacatcgactacctcacc
gcgtcggaggaggacgacttcatcgtcgcccaggccaacgcgccgctgaccgctgacctc
cacttcgccgaggaccgcgtcctggcccgccgcaagggcggcgaggtcgacctcttcccg
cgcgacgagatcggctacatggacgtctccccgcgccagatggtgtcggtcgcgacctcg
ctcatcccgttcctcgagcacgacgacgccaaccgcgcgctcatgggtgcgaacatgcag
cgtcaggccgtgccgctgctgcgcagcgagtcgccgttcgtcggcaccggcatggagggc
ttcgccgcgatcgacgccggtgacgtggtcatcgcgaacaacgccggtgtggtccaggag
gtctccgccgacgtcgtctccgtcctgctcgacgagggcggcaccgaggagtactacctc
cgcaagttcgaccgctccaaccagggcacgtcctacaaccaccgcgtcgtcgtctccgag
ggcgagcgggtcgagaagggcgaggtcatcgcggatggcccggccaccgagaacggcgag
ctcgcgctcggcaagaacctcctcgtggcgttcatgccgtgggagggccacaactacgag
gacgcgatcatcctcagccagaacctcgtgaaggacgacgtgctctcgtcgatccacatc
gaggagtacgaggtggatgcgcgcgacacgaagctgggcaaggaggagatcacccgtgac
ctccccaacgtcagcccggagctgctggccgacctcgacgagcgcggcatcatccgcatc
ggcgccgaggtccgtcccggcgacatcctcgtcggcaaggtcacgccgaagggcgagacc
gagctgagcgccgaggagcgcctgctccgcgcgatcttcaacgagaagagccgcgaggtg
cgagacaccagcctcaaggtgcctcacggtgaagagggcacgatcatcgccgtcaaggag
ttctcggccgagaacgacgacgagctcggctcgggcgtcaaccagcgcgtggtcgtctac
atcgctcagaagcgcaagatcaccgcgggtgacaagctcgccggtcgtcacggcaacaag
ggcgtcatctcgaagatcctgccggtggaggacatgccgttcctcgccgacgggaccccg
gtcgacgtcgtgctcaacccgctcggcatccccggccgcatgaacttcggccaggtgctc
gagacccacctcgggtggatcgcgaagcagggctgggaggtcgacggcaagcccaagtgg
gccgcgcgtctgcccgagcaggcccgctcggccgagcccggcacgaaggtcgcgaccccg
gtcttcgacggtgcgtcggaggaggagatcgcaggtctgctcgactcgaccatcccgaac
cgcgacggcgagcgcctgatcgactcgagcggcaagacgcgcctgttcgacggccgctcc
ggtgagccgtacccgtacccggtctcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagatccacgcccgttcgaccggtccgtactcgatgatcacccagcag
ccgctcggtggtaaggcgcagttcggtggccagcgcttcggtgagatggaggtgtgggcc
ctcgaggcctacggcgccgcgtacgcgctgcaggagctcctgacgatcaagtccgacgac
atcctcggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatccaggagccc
ggcatccccgagtcgttcaaggtgctcatcaaggagatgcagtcgctctgcctgaacgtc
gaggtcctctcggccgacggcaccgcggtcagcctccgcgacaccgacgacgaggtgttc
cgtgccgctgaggagctcggcatcaacatctccagccgcttcgagtcgtcgtccatcgac
gacatctga
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integrated database retrieval system
