Cnuibacter physcomitrellae: B5808_09120
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Entry
B5808_09120 CDS
T04797
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5808_09120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_09120
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5808_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
UVR
HHH_2
DUF7508
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
ARJ05361
UniProt:
A0A1X9LN34
LinkDB
All DBs
Position
complement(1922910..1924799)
Genome browser
AA seq
629 aa
AA seq
DB search
MADTVPYRPKAGEIPTQPGVYRFKDAQGRVLYVGKAKNLRARLSNYFQPLRNLHERTRRM
VTTASSVEWTVVGTDIESLQLEYTWIKEFNPPFNVKFRDDKTYPFMAITLGDEAPRVMVT
RNRRIPGAKYFGPYPKIWAVRDTIDLMIKAFPIRTCSDSSYKQAMQSGRPCFPGQIGRCG
GPCSGRVTIEEHRAIVDDFVSFMNGGDRRFVTQATKRMKDAAERQDYEAAAKYRDQLQAL
EAVLEKSAVVLREGVDADLFAVEHDELAASVQQFIVRGGRIRGERAWTVDKELDLDTGEL
VDSILQAAYEGQDPPRRILVPALPDDVDELESWLAERRGPGRKVTIQTPQRGEKASLMQT
ASMNAKNNLTLYKMRRSSDFVARSQALTDIQDALGMDEAPLRMECYDVSHLSGTNIVASM
VVFEDGLPRKDQYRRFTIADSTDDTESLYQVLTRRLAYLKEDRDAPLEQPDPTAEGEQQS
QRRRKFSYPPQLLIVDGGQPQVAAAKRALDESGVEGITLAGIAKRLEEVWLADSDYPVIL
PRSSEALFMIQRIRDEAHRFAITHQRTRRKRDITSVLSEIPGLGPSRVKELLKHFGSVTE
LKKADAAAIAEVKGIGPALASTIETTLAG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccgtcccgtaccggccgaaggcgggggagatccccacccagccgggtgtc
taccggttcaaggatgcgcagggcagggtgctctacgtcggcaaggcgaagaacctgcgc
gcgcgtctgagcaactacttccagccgctgcggaacctccacgagcgcacgcgccgcatg
gtgaccaccgcgtcgagcgtggagtggacggtcgtcggcaccgacatcgagtcgctgcag
ctggagtacacgtggatcaaggagttcaaccctccgttcaacgtcaagttccgcgacgac
aagacctacccgttcatggcgatcaccctgggcgacgaggcgccgcgggtgatggtgaca
cgcaaccggcgcatcccgggggcgaagtacttcgggccgtacccgaagatctgggcggtc
cgcgacacgatcgacctcatgatcaaggcgttccccatccgcacctgctccgactcgagc
tacaagcaggccatgcagtcgggccggccgtgcttccccgggcagatcggccgatgcggc
gggccgtgctcgggcagggtcacgatcgaggagcaccgggcgatcgtcgacgacttcgtc
tcgttcatgaacgggggagaccggcgcttcgtcacgcaggcgacgaagcggatgaaggat
gccgccgagcgccaggactacgaggccgcggcgaagtaccgcgatcagctgcaggcgctg
gaggccgtgctcgagaagagtgcggtcgtgctgcgcgagggcgtcgacgccgacctgttc
gcggtcgagcacgacgagctcgcggcgagcgtgcagcagttcatcgtgcggggcggccgc
atccgcggagagcgcgcgtggaccgtcgacaaggagctcgacctcgacaccggtgagctg
gtcgactcgatcctgcaggcggcgtacgagggtcaggatccgcctcgacgcatcctcgtg
cccgccctccccgacgacgtcgacgagctcgagtcgtggctggccgagaggcgggggccg
ggccgcaaggtgacgatccagaccccgcagcgcggcgagaaggcctcgctcatgcagacg
gcgtcgatgaacgcgaagaacaacctcacgctctacaagatgcggcggtcgtccgacttc
gtggcccggtcgcaggcgctcaccgacatccaggacgccctcggcatggacgaggctccg
ctgcggatggagtgctacgacgtctcgcacctgtcggggaccaacatcgtcgcctcgatg
gtcgtcttcgaggatggtctgccccgcaaggaccagtaccgtcgcttcacgatcgccgac
tccaccgacgacaccgaatcgctgtaccaggtgctcaccaggcgcctcgcctacctcaag
gaggaccgcgacgcgccgctcgagcagcccgatcccacggccgagggcgagcagcagtcg
cagcgccgacggaagttctcctacccaccgcagctgctcatcgtcgatggcggccagcct
caggtcgcggcggccaagcgcgcgctcgacgagtcgggggtggagggcatcacgctcgcc
ggcatcgcgaagcgtctggaagaagtgtggctcgccgacagcgactacccggtcatcctc
ccgaggtcgagcgaggcgctgttcatgatccagcgcatccgcgacgaggcccaccggttc
gccatcacccaccagcgcacgagacggaagcgcgacatcacgagcgtgctcagcgagatc
ccggggctcggcccgtcgcgggtgaaggagctgctgaagcacttcggctcggtcaccgag
ctgaagaaggcggatgcggcggccatcgccgaggtgaaggggatcggtccggccctcgcg
tccacgatcgagaccaccctcgccgggtag
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