Cnuibacter physcomitrellae: B5808_09130
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Entry
B5808_09130 CDS
T04797
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5808_09130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_09130
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5808_09130
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5808_09130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_5
AAA_30
UvrD-helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARJ05363
UniProt:
A0A1X9LJM2
LinkDB
All DBs
Position
complement(1928033..1930102)
Genome browser
AA seq
689 aa
AA seq
DB search
MEPTRSVRPFEVISEYEPSGDQPNAIAELAGRINAGETDVVLLGATGTGKSATTAWLVEA
VQRPTLVLAHNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDSSI
NAEVERLRHSTTNSLLSRRDVVVVSTVSCIYGLGTPEQYMNAMVALQVGQRVDRDWLIRR
FVSMQYQRNDVDFSRGNFRVRGDTIEIIPVYEELAIRIEMFGDEIEALYSLHPLTGDVVQ
KLDAVSVFPGSHYVADTNVMHRAIETIQVELEERLTELERQGKLLEAQRLRMRTTFDLEM
MQQIGFCSGIENYSRHIDGRMPGEAPHCLLDYFPDDFLVVIDESHVTVPQIGAMYEGDAS
RKRTLVEHGFRLPSALDNRPLKWDEFKDRVGQTVYLSATPGRYEMGIADGVVEQIIRPTG
LVDPELIIKPSKGQIDDLLEEIRLRAERDERVLVTTLTKKMAEELTDFLTEAGVRVRYLH
SDVDTLRRVELLTELRAGVYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQ
TIGRAARNVSGQVHMYADKMTDSMQLAIEETDRRREKQIAYNTANGIDPQPLRKRIADIT
EALAREGADTADLLRERAGRGKKSPTPSLRREGLAASGANELESIIADLNSQMLEAAAEL
KFELAARLRDEVSELKRELRQMERAGHVA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgacccgctccgttcggcccttcgaggtcatcagcgaatacgagccgagcggc
gaccagcccaacgcgatcgcggagctcgccggccgcatcaacgcgggtgagaccgacgtg
gtgctgctcggcgccaccggtaccggcaagtccgccacgacggcctggctcgtcgaggcc
gtgcagcgccccaccctcgtgctggcccacaacaagaccctcgccgcgcagctcgccaac
gagttccgcgagctgctgcccaacaacgccgtcgagtacttcgtctcgtactacgactac
taccagcccgaggcgtacgtcccgcagaccgacaccttcatcgagaaggacagctcgatc
aacgcggaggtggagcggcttcgccactccaccacgaactcgctgctgtcgcgccgcgac
gtggtcgtggtctccacggtgtcctgcatctacggtctgggcacgcccgagcagtacatg
aacgcgatggtggcgctgcaggtcgggcagcgggtcgaccgcgactggctcatccgccga
ttcgtgtcgatgcagtaccagcgcaacgacgtcgacttctcccgcggcaacttccgcgta
cggggcgacacgatcgagatcatcccggtctacgaggagctggccatccgcatcgagatg
ttcggcgacgagatcgaggcgctgtacagcctgcatccgctcacgggagacgtggtgcag
aagctcgatgccgtctcggtcttccccgggtcgcactacgtggccgacaccaacgtcatg
catcgggccatcgagaccatccaggtcgagctggaggagcgtctcaccgagctcgagcgg
cagggcaagctgctcgaggcgcagcgactgcgcatgcgcaccacgttcgacctcgagatg
atgcagcagatcggcttctgctcgggcatcgagaactactcgcgccacatcgacgggcgg
atgccgggggaggccccgcactgcctgctcgactacttccccgacgacttcctcgtcgtg
atcgacgagtcgcacgtcaccgtgccgcagatcggcgcgatgtacgagggcgacgcgtcg
cgcaagcggacgctggtcgagcacggcttccgccttccgagcgcgctcgacaaccggccg
ctcaagtgggacgagttcaaggatcgtgtcgggcagacggtctacctgtccgcgactccc
ggccgctacgagatgggcatcgcggatggggtggtcgagcagatcatccgccccacgggc
ctggtcgaccccgagctgatcatcaagccctcgaagggtcagatcgacgacctgctcgag
gagatccgcctccgcgccgagcgcgacgagcgcgtgctcgtcaccacgctcacgaagaag
atggcggaggagctcaccgacttcctcaccgaggccggggtgcgtgtgcgctatctgcac
tcggatgtcgacaccctccgtcgggtcgagctgctgaccgagctgcgcgcgggcgtctac
gacgtcctcgtcggcatcaacctcctccgcgaggggctcgacctcccggaggtgtcgctg
gtcgcgatcctcgacgccgacaaggagggcttcctccgctcgtcgacgtcgctcatccag
acgatcggtcgcgccgctcgcaacgtgtcgggtcaggtgcacatgtacgccgacaagatg
accgactccatgcagctcgccatcgaggagaccgaccgtcgtcgcgagaagcagatcgcg
tacaacacggcgaacgggatcgatcctcagccgctgcggaagcggatcgccgacatcacc
gaggcgctcgcccgcgagggcgccgacaccgccgacctcctgcgcgagcgcgccggccgg
ggcaagaagagccccacgccgagcctgcgccgcgagggcctcgcggcgtccggcgccaac
gagctcgagtcgatcatcgccgacctcaactcacagatgctcgaggccgccgccgagctc
aagttcgagctcgccgcgcgcctgcgcgacgaggtctccgagctcaagcgcgagctccgc
cagatggagcgcgccggccacgtcgcctga
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