Cnuibacter physcomitrellae: B5808_09700
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Entry
B5808_09700 CDS
T04797
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cphy
Cnuibacter physcomitrellae
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cphy03032
]
B5808_09700
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_09700
Enzymes [BR:
cphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B5808_09700
DNA replication proteins [BR:
cphy03032
]
Prokaryotic type
DNA Topoisomerases
B5808_09700
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B5808_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
DUF1192
Inp1
Motif
Other DBs
NCBI-ProteinID:
ARJ05466
UniProt:
A0A1X9LJU3
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All DBs
Position
2055344..2057785
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AA seq
813 aa
AA seq
DB search
MTPKNESIDAAAEKILDVDVSQEMQESFLEYAYSVIYSRALPDARDGLKPVQRRILYQMD
EMGLRPDRGHVKSARVVGEVMGKLHPHGDTAIYDALVRLAQPWTMRLTLVDGHGNFGSPD
DGPAAQRYTEARLAPAAMAMVADLDEDVVDFVPNYDNQFTEPSVLPAAIPNLLVNGASGI
AVGMATNMAPHNLIEVVAGAQHLLENPQASVDDLMRFIPGPDLPGGGTIVGLDGVRDAYE
NGRGAFKTRAKVSIETLSPRKTGLVVTELPYLVGPEKVIAKIKDGVTSKKIGGISDVTDL
TDRSHGLRLVIGIKTGFNPEAVLEQLYKLTPLEESFNINNVALVDGGPATLGLRDLLAVY
INHRIEVVTRRTRYRLARRKERLHLVEGLLIAILDIDEVIQLIRSSDDSEQARERLMTVF
DLSQVQAEYILELRLRRLTRFSRIELEAERDELRAEIERLEAMLADPALVRAAVSEELDA
VADTYGTPRRTLLTEARPAAAGSAKKNQPVLELSDAPCVVLFSTTGRVVRIDRGDDEDAP
AAPTRRSKHDALRSVVETTRRAEIGAVTDTGRLVRMPVMDLPSVPAGSVQLGAGVKVNEY
LGLDRKERVVGLVSLDSEVPIALGTRQGVVKRVATGAYPPRPDFEIIALKPGDAVVGVAQ
STDEELVFIATDAQLLRFPQASVRPQGVAAGGMAGINLGAGSSVIFFGSVDASAETVVVT
VAGSTAALPGTDPGSSKVSDLSEFPPKGRATGGVRAQRFLKGEDALTAAWAGRAPALAVG
DDGAARALPESGARRDASGVALGGVIGSIGFSR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgaagaacgagagcatcgacgccgccgcagagaagatcctcgacgtcgacgtc
tctcaggagatgcaggagtccttcctcgagtacgcgtactcggtgatctactcgcgtgcc
ctgcccgacgcccgagacggcctcaagccggtgcagcgccgcatcctctaccagatggac
gagatgggcctgcgtcccgaccgcgggcacgtgaagagcgcccgcgtcgtcggcgaggtg
atggggaagctgcacccccacggcgacaccgccatctacgacgccctggtgcgtctggcc
cagccgtggaccatgcgcctgaccctggtcgacggtcacggcaacttcggctcgcccgac
gacgggcccgccgcccagcgctacaccgaggcacggctggccccggccgccatggcgatg
gtcgccgacctcgacgaggacgtcgtcgacttcgtgcccaactacgacaaccagttcacc
gagccgtccgtgctcccggcggcgatcccgaacctcctggtcaacggggcgagcggcatc
gcggtgggcatggccacgaacatggccccgcacaacctcatcgaggtggtcgcgggcgcc
cagcacctgctcgagaacccgcaggcctcggtcgacgacttgatgcgcttcatccccggc
cccgacctgcccggcggcgggacgatcgtcgggctcgacggcgtccgcgacgcgtacgag
aacggccgcggtgcgttcaagacgcgcgcgaaggtcagcatcgagacgctctcgccccgc
aagacggggctcgtcgtcaccgagctgccgtacctggtcgggccggagaaggtgatcgcg
aagatcaaggacggcgtcacctcgaagaagatcggcggcatcagcgacgtcaccgacctc
accgaccgctcgcacgggctccgtctcgtcatcggcatcaagacggggttcaaccccgag
gcggtgctcgagcagctgtacaagctcactccgctcgaggagagcttcaacatcaacaac
gtcgcgctcgtcgacggcggccccgccacgctcggtctgcgagacctgctcgcggtctac
atcaaccaccgcatcgaggtcgtcacccgccgcacgcgctatcggctcgcacggcgcaag
gagcggctgcacctcgtcgagggtctgctcatcgcgatcctcgacatcgacgaggtcatc
cagctgatccggtcctcggacgacagcgagcaggctcgcgagcggctgatgacggtgttc
gacctcagccaggtgcaggccgagtacatcctcgagctgcgcctgcgccgcctcacccgc
ttctcgcggatcgagctcgaggccgagcgcgacgagctccgcgccgagatcgagcggctc
gaggccatgctggccgatcccgcgctcgtgcgtgccgcggtgtcggaggagctcgacgcc
gtcgccgacacgtacgggaccccgcgtcgcaccctgctgaccgaggcccgccccgcggcc
gccggctcggcgaagaagaaccagcccgtgctcgagctgtcggatgcgccctgcgtcgtc
ctcttcagcaccaccggccgcgtggtgcgcatcgaccggggcgacgacgaggacgctccc
gccgcgcccacgcgacggagcaagcacgacgccctgcgctccgtggtcgagaccacgcga
cgggccgagatcggcgccgtcaccgacaccgggcggctcgtgcggatgccggtcatggac
ctgccgtccgtgcccgcgggatccgtgcagctgggcgccggggtcaaggtgaacgagtac
ctcggcctcgaccgcaaggagcgtgtggtcgggctcgtgtcgctcgactcggaggtgccg
atcgcgctggggacacgtcagggcgtggtcaagcgggtcgcgaccggcgcctatccgccg
cgtcccgacttcgagatcatcgcgctcaagccgggcgacgccgtggtgggggtggcgcag
tcgaccgacgaggagctcgtcttcatcgcgaccgacgcgcagctgctccgcttcccgcag
gcgtcggtccggccccagggcgtcgcggcgggcggcatggcgggcatcaacctcggcgcg
ggatcgtcggtgatcttcttcggctccgtcgatgcctccgccgagacggtcgtggtcacg
gtcgcgggatcgacggctgccctcccggggaccgatcccggatcgagcaaggtctccgac
ctcagcgagttccctccgaaggggcgcgcgaccggcggcgtccgggcgcagcgattcctg
aagggcgaggacgcactgaccgcggcctgggcaggtcgtgccccggcgctcgccgtcgga
gacgacggcgccgcccgggccctcccggaatcgggagcccgacgcgatgcgtccggagtg
gccctgggcggcgtgatcggctcgatcggcttctcccgctag
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