Cnuibacter physcomitrellae: B5808_10290
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Entry
B5808_10290 CDS
T04797
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cphy
Cnuibacter physcomitrellae
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cphy03016
]
B5808_10290
Enzymes [BR:
cphy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B5808_10290
Transfer RNA biogenesis [BR:
cphy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5808_10290
Prokaryotic type
B5808_10290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ARJ07310
UniProt:
A0A1X9LZ24
LinkDB
All DBs
Position
complement(2172077..2172997)
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AA seq
306 aa
AA seq
DB search
MAPPAPQSGILLVDKPQGITSHDVVARARRALGTRKVGHAGTLDPMATGLLVLGVGASTR
LLTYVVGLGKEYRATVRLGASTVSDDADGEVVAWAPSRTVSDAAIDAAFAGQVGDVQQVP
SAVSAIKVDGRRAYARVRAGEDVELAPRSVTIESITRTAEPRRLVVDGHDVIDVDIVVRC
SSGTYIRAIARDAGTSLGVGGHLTALRRTAIGPFAVTEAVDGASLPDERPELLGAAATAE
RLFPVVRLDAVGAVALSQGKRIPVEHSDTAGPVAAIAEDGRLIGLVRVDRGIARTLVNFP
TDGAEG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atcgcacccccggcgccgcagagcggcatcctgctcgtcgacaagccccaggggatcacc
agccacgatgtcgtcgctcgcgcccggcgtgccctcggaacgcgcaaggtgggccacgcc
gggacgctcgaccccatggcgacggggctcctcgtcttgggcgtcggcgcgtcgacgcgg
ctcctcacgtacgtcgtagggctcggcaaggagtaccgggcgaccgtccggctcggcgcc
tccacggtgagcgacgacgccgacggcgaggtcgtcgcctgggcgccgagccggacggtg
tccgatgccgcgatcgacgcggccttcgccggtcaggtcggcgacgtccagcaggtgccg
agcgccgtgagcgcgatcaaggtcgacggccggcgggcgtacgcgcgcgtgcgggcgggg
gaggacgtggagctcgcgccgcgctcggtgaccatcgagtcgatcacgcggaccgccgag
ccccggcgtctcgtcgtcgacggacacgacgtgatcgacgtcgacatcgtggtgcgctgc
tcctccgggacgtacatccgtgcgatcgcgcgcgacgcggggacgtccctgggggtcggc
ggccacctcacggcgctccggcggacggccatcggcccgttcgcggtcacggaggcggtc
gacggcgcgagcctgccggacgagaggccggagctgctcggcgccgccgcgaccgcggaa
cggctcttcccggtggtgcgtctcgacgccgtcggtgccgtggcgttgagccagggcaaa
cggatcccggtggagcactccgacacagccgggccggtggccgcgatcgccgaggacggg
cgtctcatcggtctcgtccgggtcgaccggggcatcgcgcgcacgctcgtcaacttcccg
accgacggggcggagggctga
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