Cnuibacter physcomitrellae: B5808_10515
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Entry
B5808_10515 CDS
T04797
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5808_10515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_10515
Enzymes [BR:
cphy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B5808_10515
DNA repair and recombination proteins [BR:
cphy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5808_10515
Prokaryotic type
B5808_10515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARJ05609
UniProt:
A0A1X9LR40
LinkDB
All DBs
Position
complement(2218224..2218916)
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AA seq
230 aa
AA seq
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MTALSLPQLAEAGLVDPGWAAALEPVGPTLAALGDFLRAETAAGRGYLPAGPDVLRAFRT
PLADVRVLIVGQDPYPTPGHPIGLSFAVERHVRPVPRSLGNIYRELRDDLGIEPPPHGDL
TRWSQNGVMLLNRVLTVQPGQPGSHRGRGWEQITDRAIEVLAGRGGPLVAILWGRDAASL
RPALGSVPSVSSPHPSPLSASRGFFGSKPFSAVNRLLVEQGADPVDWRLD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctctccctcccgcagctcgccgaggcgggtctcgtcgatcccggatgggcg
gcggcgctcgagcccgtggggccgacgctcgccgcgctcggcgacttccttcgtgccgag
accgccgcaggcaggggctacctccccgccggtccggatgtgctccgggcgttccggacg
ccgctggccgacgttcgggtgctcatcgtggggcaggatccctacccgaccccggggcat
ccgatcgggctctcgttcgccgtcgagcgtcacgtccgcccggtgcctcgcagtctcggc
aacatctaccgcgagctccgcgacgacctcgggatcgagccgccgccgcacggcgacctg
acgcggtggagccagaacggggtcatgctcctcaacagggtcctcacggtgcagccgggg
cagcccggatcccaccggggtcgtggctgggagcagatcaccgaccgcgccatcgaggtc
ctggccggtcgcggcggccccctggtcgcgatcctctgggggcgcgacgcggcctccctc
cgccctgcgctcggctccgtgccgtcggtatcgagcccgcatccgagcccgctctcggcc
tcccgcggcttcttcggctcgaagccgttctccgcggtgaaccgcctgctcgtcgagcag
ggtgccgacccggtcgactggcgcctggactga
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