Cnuibacter physcomitrellae: B5808_10990
Help
Entry
B5808_10990 CDS
T04797
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03420
Nucleotide excision repair
cphy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5808_10990
03430 Mismatch repair
B5808_10990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_10990
Enzymes [BR:
cphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5808_10990
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5808_10990
MMR (mismatch excision repair)
Other MMR factors
B5808_10990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ARJ05688
UniProt:
A0A1X9LN31
LinkDB
All DBs
Position
complement(2326129..2329392)
Genome browser
AA seq
1087 aa
AA seq
DB search
MTDALFDLDDFVEEPTPRVPLSATEIAERLGLPTPTEQQRAVIESPLEPRIVVAGAGSGK
TETMAARVVWLVANGHVALSEVLGLTFTRKAAGELAARIQQRVAQLSEHGLGPEIDAFEA
PAISTYNAFANTIFRENAVRIGQEGDAQVLSEASAWQLARHVVLTKGDDRLADLEKSPDQ
ITTAVLDLSRAMAENVADGLDVVDYAAELLALRELPTGSARVKAALRSSLVAPFAAVAAL
EPLVALAEEYAAEKRRRGLIEFSDQVALALRIVETAPVVTEEHRRRYRVVLLDEYQDTSV
VQTRLLSRLFGGHPVMAVGDPHQSIYGWRGASAANLGRFANDFGAVDPHPFALSTSWRNP
RLVLDAANTIVAPLSAGVAVERLGARPGAAEGSVEVAFAQTVDDEARAVARWFAERMRGA
GSPPSAALLCRSVKNVDRFTSALDDAGIPYHVLGLGGLLSEPVVVDLVSTLRVLYHPTAG
PELVRLLSGARWRIGPRDLVGLKHVAAWLARRDHRHAPLDDDVRGMLRSSVAEGEAPSLV
DALDFVTTAPADYGVLAGISAVGLERMRDAGRTLTALRARTGLALADLVRVVVQELRLDI
EVLAGAHPEAGIAALDALEEQISGFTALDPSAGLGAFLAWLQEAEQRDRLAPRSEEAEAG
TVQILTIHGAKGLEWDLVAIPRLVEGELPDAPRTKKGWLAFGELPFAFRGDHLELPTFHW
RGAEHQGELADALGEFEQQIADRHAEEQRRLAYVAVTRAREQLLLTGAFWSTQKSSRGPS
RFLHELREVGVIPADALPDAPDEEENPLADGASRTVWPRDPLGGRRSRVERAAAAVTAAD
PGAETPWDAEIELLLAERDAAGRAPVLDVPTRIPASRFKDWVTDPEQVAARLARPMPERP
YRQTRLGSRFHLWLEARFAAGGGALLDERLVLPGNDVLDAEADELDGAELPGEGSDLLEV
DDDRLEELVRIFEGSEFAARSPVEVETEIHLVLEGRILICRLDAVFEEDGRFEVVDWKTG
RPPKDDADLELKQLQLSLYRLAYATWRGVPVESVDACFYYVADDVVIRPERLHTEPELRA
LVSRAFS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgctcttcgacctcgacgacttcgtcgaggagccgaccccccgggtgccc
ctcagcgccaccgagatcgccgagcggctcgggctgcccacgcccacggagcagcagcgg
gccgtcatcgagtcgccgctcgaaccgcggatcgtggtggccggagcgggcagcggcaag
accgagacgatggccgcccgcgtggtgtggctcgtggccaacggccacgtcgccctctcg
gaggtgctcggtctgacgttcacccgcaaggccgcgggcgagctggccgcgcgcatccag
cagcgggtggcgcagctctccgagcacggcctggggccggagatcgacgcgttcgaggct
ccggcgatctccacctacaacgcgttcgcgaacacgatcttccgcgagaacgcggtccgc
atcggtcaggagggcgacgcgcaggtgctgagcgaggcctcggcctggcagctcgcccgg
cacgtcgtgctgacgaagggcgacgaccggctcgccgacctcgagaagagccccgaccag
atcacgaccgccgtgctcgacctcagccgcgccatggccgagaacgtcgccgacggcctc
gacgtcgtcgactacgccgcggagctcctggcgctccgcgagctgccgaccggctcggcg
cgggtcaaggcggcgctgcgctcctccctcgtcgcgcccttcgcggccgtcgccgcgctg
gagcccctcgtcgccctggccgaggagtacgccgccgagaagcgccggcgggggctgatc
gagttctccgaccaggtcgcgctcgcgctgcgcatcgtcgagacggcgcccgtcgtcacg
gaggagcatcgccggcggtaccgcgtcgtgctgctcgacgagtaccaggacaccagcgtc
gtgcagacccgtctgctctcgcggctgttcggcggccacccggtgatggccgtgggcgac
ccccaccagtcgatctacggatggcgcggggccagcgccgcgaacctgggccggttcgcg
aacgacttcggggcggtcgacccgcatccgttcgcgctgtcgacgagctggcggaacccc
aggctcgtgctcgacgccgccaacacgatcgtggcgccgctctcggcgggggtcgcggtg
gagcgcctcggtgctcgcccgggtgccgcggaggggtcggtcgaggtggccttcgcgcag
acggtcgacgacgaggcccgcgcggtcgcccgctggttcgccgagcggatgcgcggagcc
ggctcgccgccctccgccgccctgctctgccgatcggtgaagaacgtcgaccggttcacg
tcggcgctcgacgacgcaggcatcccgtaccacgtgctcggcctcggcggcctgctgagc
gagcccgtcgtggtcgatctcgtgtcgacgctgcgggtgctctaccaccccacggcgggg
cccgagctcgtgcgtctgctgtcgggtgcgcgctggcggatcggaccgcgcgacctcgtg
ggtctcaagcacgtggcggcatggctcgcccggcgcgaccaccggcacgccccgctcgac
gacgacgtgcgcggcatgctccgatcctcggtcgccgagggggaggcgccctccctcgtc
gatgcgctcgacttcgtcaccacggctcccgccgactacggcgtgctcgcggggatctcg
gcggtcggtctcgagcggatgcgcgacgccggacgcacgctcaccgcgctccgcgcccgc
accgggctcgccctcgccgacctcgtccgtgtcgtcgtgcaggagctgcgactcgacatc
gaggtgctcgccggtgcgcatccggaggccgggatcgccgcgctcgacgccttggaggag
cagatcagcggcttcaccgcgctcgacccctcggcgggcctcggcgccttcctcgcctgg
ctgcaggaggccgagcagcgcgaccggctcgcaccccgcagcgaggaggccgaggcgggc
acggtgcagatcctcaccatccacggggccaagggtctcgaatgggacctcgtcgccatc
ccgcgactggtggagggcgagctcccggacgcgccgcgcacgaagaaggggtggctcgcg
ttcggcgagctgccgttcgcgttccgcggcgaccacctcgagctgcccaccttccactgg
cgcggcgccgagcatcaaggtgagctggccgacgcgctcggcgagttcgagcagcagatc
gccgatcggcacgccgaggagcagcggcggttggcgtacgtcgccgtgacccgcgctcga
gagcagctgctgctcacgggggcgttctggtcgacgcagaagtcgtcgcggggtccgagc
cggttcctgcacgagctgcgcgaggtcggcgtcatcccggccgacgccctgcccgacgca
cccgacgaggaggagaacccactcgccgacggcgcgtcgcgcacggtgtggccgcgcgac
ccgctcggcggccgccgcagccgcgtggagcgggccgctgccgcggtcacggccgccgac
ccgggcgccgagacgccgtgggatgccgagatcgagctcctcctggccgagcgcgacgct
gccggtcgtgccccggtgctcgacgtgcccacgcgcatcccggcctcgcggttcaaggac
tgggtgaccgatcccgagcaggtggcggctcgcctcgcccggccgatgccggagcgaccc
taccggcagaccaggctcgggtcgcgcttccacctctggctcgaggcccgcttcgccgcg
ggcgggggagcgctcctcgacgagaggctcgtgctgcccggcaacgacgtgctcgacgcc
gaggccgacgagctcgatggcgccgagctcccgggcgagggctccgacctgctcgaggtc
gacgacgaccggctcgaggagctcgtgcggatcttcgagggatccgagttcgcggcgcgg
tcaccggtggaggtcgagaccgagatccatctggtgctcgaggggcgcatcctcatctgc
cgactcgacgccgtgttcgaggaggacggccgcttcgaggtcgtcgactggaagacgggt
cgcccgccgaaggacgacgccgacctcgagctgaagcagctgcagctctccctctaccgg
ctggcgtacgccacctggcgcggggtcccggtcgagtcggtcgacgcctgcttctactac
gtggccgacgacgtcgtcatccgccccgagcgactgcacaccgagcccgagctccgcgcc
ctggtctcccgcgccttctcctga
DBGET
integrated database retrieval system
