Cnuibacter physcomitrellae: B5808_11875
Help
Entry
B5808_11875 CDS
T04797
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5808_11875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_11875
Enzymes [BR:
cphy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B5808_11875
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B5808_11875
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5808_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
TackOD1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ARJ05845
UniProt:
A0A1X9LKV9
LinkDB
All DBs
Position
complement(2533420..2534433)
Genome browser
AA seq
337 aa
AA seq
DB search
MPELPEVEVVRAGLEPAVSGAVILGVEVFEPRSLKRHDQLLGAFDALLTGRRMLGAGRRG
KFLWLPLSAIQGDESPLALVAHLGMSGQVLLREPGYEESGLLRIRLHVEHPEHGELWVNF
VDQRIFGSMAVDRLVPADDGREAGWFGPGLAHDVGDVEAAVDDALAPLTPALLAEWRSGV
PSQVAHIARDPLDPAFDDDAFLAALSKRRTGIKRALLDQTLVSGIGNIYADESLWAARVH
YEHPTDRLPRARARVLLAEVRLVLEKALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQG
KPCPRCGTPIVREQFMNRGSHLCPRCQRRPRAPRTAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgaggtggtgcgggccgggctcgagcccgcggtcagcggt
gcggtgatcctcggcgtcgaggtgttcgagccacggtcgctgaagcgtcacgatcagctc
ctcggagccttcgacgcgctgctcacgggtcggcggatgctcggagccggccgccggggg
aagttcctgtggctcccgctctcggcgatccagggcgacgagtcgccgctcgcgctcgtc
gcgcatctgggcatgagcggccaggtgctgctccgggagccggggtacgaggagtcggga
ctcctgcgcatccgactgcacgtggagcacccggagcacggtgagctgtgggtgaacttc
gtcgaccagcgcatcttcggctcgatggccgtcgatcgtctcgtccccgcggacgacggc
cgggaggccgggtggttcggtccgggcctcgcccacgacgtgggcgacgtcgaggccgct
gtcgacgacgcgctcgccccgctgacgcccgcgctcctcgccgagtggcggagcggcgtc
ccctcgcaggtcgcccacatcgcgcgcgatccgctcgacccggccttcgacgacgacgcg
ttcctcgctgcgctgtcgaagcgccgcaccgggatcaaacgcgccctcctcgatcagacg
ctcgtgtcgggcatcgggaacatctacgccgacgagtcgctctgggcggcgcgggtgcac
tacgagcatccgaccgatcggctgccccgcgcccgcgcccgcgtgctgctcgccgaggtg
cgtctcgtgctggagaaggcattggccgagggcggcaccagcttcgatgcccagtacgtc
aacgtcaacggcgcctcgggctacttctcccacagcctcaacgcctacggccagcagggg
aagccgtgtccccgctgcggcacgccgatcgtgcgggagcagttcatgaaccgcggctcc
cacctctgcccgcgctgccagcgtcgcccccgggcgccacgcacggcggcctag
DBGET
integrated database retrieval system
