Chitinophaga pinensis: Cpin_0009
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Entry
Cpin_0009 CDS
T00959
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like protein
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpi03032
]
Cpin_0009
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_0009
Enzymes [BR:
cpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Cpin_0009
DNA replication proteins [BR:
cpi03032
]
Prokaryotic type
DNA Topoisomerases
Cpin_0009
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cpin_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
Motif
Other DBs
NCBI-ProteinID:
ACU57518
UniProt:
A0A979FYL5
LinkDB
All DBs
Position
complement(12971..14029)
Genome browser
AA seq
352 aa
AA seq
DB search
MNGRPSLPVIESIRNRPVMYLGSVNSYGIRRLMKMLITDYLEDVTGLSTVEITFNPDSFV
SVVLSGMPVDELLHEVAFLQEISSGKNFKIALLIAISRFVLVRIVVNGEIHSITSHAGIY
EVEMHPADGEPNGIKVDFQLEEQIFKHNQVAYIPMNIMLQQLAYLNPGLKIISVDNRGEL
QRNVFYFRTGISELFNDLLDKHDYGSMNAWLPIELKTAINGYIFHVILRYHHIYTVYPAP
YIRSFANNEATKGHGSLVEGVLKGLEDAFVEVGEKEGVELKVNKKRIGKMLVLFAAVKGE
PLTYDGRSKDKLDMPGLKKDVRKFVKRGVLKYLESNSGDRRRVLEKFIRKDS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacggccttctcttcctgttattgaatctatccgcaatcgaccggtgatgtac
ctgggatcggtgaacagttatggcatcagacgtctgatgaaaatgctgatcactgattat
ctggaagatgtaacaggcttatctaccgtagagatcacgttcaatcctgatagttttgtg
agtgtggttctttcaggtatgccggtggatgaattattacatgaggtcgcctttttgcag
gaaatctcctccggaaagaattttaaaattgcattactcatcgccatcagccgctttgtg
ctggtacgtattgtggtaaatggagagatacattctatcacctctcatgccggcatatac
gaagtagaaatgcatccggctgacggagagccgaatggtattaaagtggactttcagtta
gaagagcagattttcaagcataaccaggtggcttatattcctatgaatatcatgctgcag
cagctggcttatctgaaccccggactgaaaataatcagtgtggataaccggggggaatta
cagcggaatgtgttttatttcagaacggggatctctgaattattcaatgacctgctggat
aaacacgattatggcagtatgaatgcctggttgccgattgaactgaaaacagcgatcaac
ggttatatcttccatgttattcttagatatcatcatatttatacggtttatcctgcacca
tatatacgctccttcgctaataatgaagcaactaaaggacacggctccctggtggaaggt
gtgttaaaagggctggaggatgcttttgtggaagtgggtgaaaaagaaggcgtggaactg
aaagtgaacaaaaagcggatcggaaaaatgctcgtgctgtttgctgctgtaaagggggaa
ccgctgacgtatgatggtcgcagtaaggataaactggatatgccggggttgaaaaaagat
gtgcggaagtttgtgaaaagaggggtgttgaagtacctggaaagcaattccggggacaga
agaagagtgttggaaaagtttataaggaaagacagttag
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