Chitinophaga pinensis: Cpin_0042
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Entry
Cpin_0042 CDS
T00959
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_0042
Transporters [BR:
cpi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cpin_0042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
MHC_I_3
Motif
Other DBs
NCBI-ProteinID:
ACU57548
UniProt:
A0A979FYP3
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All DBs
Position
complement(49354..50772)
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AA seq
472 aa
AA seq
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MNNIVKILCIAILCLFICACTKFLDVGDPPDKVAANFVYSSNSGAAGVLTGVFFDLQRQG
EGFAQGRTGISLFCGLAADEFNALPISSFNDMYTNTYPYDFWSVYYKFIYRINIALEAIG
FSEKLSPDVKKHLLGEAYFLRGFIYFYLVNMYGDVPLLLTGDYKLNSKAARVDRNKVYDQ
IIKDLLDAETFLSSNYLEANVRNISIDRVRPNKFSAKAMLARVYLYKQDWINAELKSTEV
LSQKSYYDTVALNEVFAKNSKESIWQLQPVSDGIRLNTLDAEMFTLINGKPDQYFNPVWV
SDFLNHAFEIDDQRKNKWLGIAQDTSTKTEYLYISKYKYYSRNDVSKEYLTVLRVAEQYL
IRAESRVHLNKLSQAKADLDIIRIRAGLKEIQLGSTDRLLNQIYHERQVELFAEWGHRWF
DLKRIGEIDQVMTGVSPHKGGTWVSYKQLFPIPLYDLRYNVNLIQNAGYPSN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatagttaagatactttgcattgctattttatgtctatttatttgtgcatgt
actaaatttttggatgttggagatccgcctgataaagtagccgccaattttgtatattca
tctaatagtggagcagcaggagtattgacaggtgttttttttgatctacaaaggcaagga
gaaggatttgcacaaggaagaacaggaatatctttattttgtggactggctgcagacgaa
tttaatgctttgccaattagctcatttaatgatatgtataccaatacatatccgtatgat
ttttggtcggtatattacaagtttatttatcgtattaatatcgcgctggaggctattgga
ttttccgaaaaattgtctcctgatgttaaaaaacatcttctaggggaagcgtatttctta
cgtggatttatttatttttatttagtgaacatgtatggagatgtacctttacttctcact
ggagattataagttaaatagtaaagcggcacgtgtagatagaaataaagtatatgaccaa
atcattaaggatcttcttgatgcagagacttttttaagcagtaattatttggaagctaat
gtcagaaatattagtattgatcgagttcgacctaacaaatttagcgcaaaagccatgctt
gctagagtttatttgtataagcaagattggataaatgctgaattaaaatctactgaagta
ctaagccaaaaatcttattatgatacagtagctttaaatgaggtatttgctaagaatagt
aaagaatctatatggcagcttcaaccggtgtcagatggaattcgattgaatacattagat
gctgaaatgttcactttgataaatggtaaaccagatcagtattttaatcctgtttgggta
agtgatttcttaaatcacgcatttgaaatagatgatcaaagaaagaataaatggctagga
attgcccaagatacatcgacaaagacagaatatttgtatatatcaaaatataagtattac
agtagaaatgatgtatccaaagagtacttgactgttctaagagtcgcagaacaatatctt
ataagagcggagtcaagggtgcatttaaataaattgtcacaagcaaaagccgatctggat
attattcgtattagagctggccttaaagaaatacaactaggttcaacagataggttatta
aatcagatttatcatgagcgacaagttgagcttttcgctgaatgggggcatcgttggttt
gatctgaaaagaataggtgaaatcgatcaagtaatgactggcgtctcacctcataaagga
ggtacttgggtttcttataaacagcttttcccaattccattatatgacttgcgatacaat
gttaacctcattcaaaatgctggttatccttcaaactaa
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