Chitinophaga pinensis: Cpin_0652
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Entry
Cpin_0652 CDS
T00959
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_0652
03009 Ribosome biogenesis [BR:
cpi03009
]
Cpin_0652
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cpin_0652
Ribosome biogenesis [BR:
cpi03009
]
Prokaryotic type
rRNA transcription factors
Cpin_0652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
S1
KH_2
KH_1
DEK_C
Motif
Other DBs
NCBI-ProteinID:
ACU58150
UniProt:
A0A979FZQ9
LinkDB
All DBs
Position
788938..790185
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AA seq
415 aa
AA seq
DB search
MASINLIESFTEFKEAENIDRPTLMKVLEDVFKTLLRKKYGSDENFDVIVNTEKGDLEIL
RRRTIVTDGEVEDDNAQIAYSEAILVEPDYQVGEDLYEEVEILDFGRRAILAAKQTLSAR
IGDLKKNILVKKYADRVGEIVTGEVYQVWKKEVLLLDDERNELILPKSEQIPTDYFKKGE
NVRAVVKKVEMKNNAPLIILSRTHPTFLAKLLEIEVPEIFDGLIVIKKIVREPGERAKVA
VESYDDRIDPVGACVGMKGSRIHGIVRELRNENIDIINYTANIQLLIQRALTPARISRME
VDNENKYASVFLKADQVSLAIGKKGVNIKLACELTGYEIDVFRDEEQEQAEYDIDLAEFS
DEIEEWVLDELKRIGCDTARSVLDLTVEELVRRSDLEEETVKDIRRILQEEFDKE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctagtattaacctgattgagtcattcacggagtttaaagaggcggagaacattgac
cgcccgacgttgatgaaagtgttggaagatgtgttcaaaactcttctccgtaaaaagtat
ggctctgatgagaactttgacgtgattgtaaatactgagaagggtgacctggaaatttta
cgccgccgtaccattgtaacagatggagaggtagaagatgataatgcccagatcgcttat
tcggaagccattttagttgaaccagactaccaggtaggtgaagacctttatgaggaagta
gagatcctggatttcggccgcagggccatcctggctgcaaagcagactctttctgcccgt
atcggagaccttaaaaagaatatacttgtcaagaaatatgctgaccgtgtcggtgaaatt
gtaaccggtgaagtgtaccaggtatggaaaaaagaagttttattgcttgatgatgaaagg
aatgagttaattttacctaaatctgaacaaattcctaccgattatttcaagaaaggtgaa
aatgtaagggcagtagttaaaaaagtggagatgaagaataatgctccgctcatcatacta
tcccgcacccatcctaccttcctggctaaattgctggaaattgaagttccggagatcttt
gacggccttatcgtaattaagaaaatcgtgcgcgaacctggagaaagagctaaagtagct
gtggagtcttatgacgaccgcatcgaccctgtaggtgcctgcgtgggtatgaaaggtagt
cgtattcacggcattgtgcgtgaactgcgtaacgagaacatagatatcattaactatacc
gctaatattcagctgcttatccagcgtgcgctcacgccagcaaggatcagccgtatggag
gtagataatgagaataaatatgcttctgttttcctcaaggcagatcaggtatctctggca
atcggtaagaaaggcgtcaatataaaactggcctgcgaattgacaggttatgagattgat
gtcttccgtgatgaggaacaggaacaggccgaatacgacattgacctggcagaattctct
gacgagatcgaagaatgggtactggatgaactcaaacgtattggttgtgacactgcccgc
agtgtacttgacctgacagtagaggaactggtacgccgctcagaccttgaagaggaaaca
gtaaaagacataagaagaatactacaggaagaatttgataaagagtag
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