Chitinophaga pinensis: Cpin_0878
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Entry
Cpin_0878 CDS
T00959
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_0878
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cpin_0878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
AAA_22
AAA_24
AAA_16
AAA
DEAD
RUBY_RBDX
nSTAND_NTPase5
DZR
DUF7129
HypA
NTPase_1
nSTAND3
SLFN-g3_helicase
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
ACU58376
UniProt:
A0A979G0B0
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Position
complement(1050999..1052372)
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AA seq
457 aa
AA seq
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MKIKTAFFCQNCGYESAKWTGKCPSCGQWNTFVEEKVQKDIPLRNAGWQPEKEHGAKSDN
IVNLSEISGTEEERLLTPDAELNRVLGGGIVPGSLVLVGGEPGIGKSTLFLQNALLLKDI
TTLYISGEESAQQIKMRADRLQVKNDLFYLLTETSTQTIFQEIKKLRPQLVIVDSIQTLQ
SPFIESAPGSVSQIRETTAELQRFAKESHTPVFLIGHITKDGSIAGPKILEHMVDTVLQF
EGDQHYAYRILRTIKNRFGSTAELGIYEMTGGGLRQVTNPSEILISQREDQLSGVAIAAT
IEGMRPMLVEVQALVTQSVYGTPQRTATGFDLRRLQLLLAVLEKRGGFHFGVKDVFLNIA
GGIRVEDPSIDLAVLCALLSSYEDIPISSKICFAGEVGLSGEIRAVNRIEQRVAEAEKLG
FEKIFISRYNKKGTDISKFNIEVIPVGRVDEVYRGLF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaactgctttcttctgtcagaattgtggatatgaatcagctaagtggact
ggtaaatgtccgagttgtggtcaatggaatactttcgttgaagagaaagtacaaaaagat
atccctctacgtaatgccggatggcaacctgaaaaagaacacggcgccaaatcagataat
atcgtaaacctttccgagatcagcggtaccgaagaagaaagactactcacaccagatgca
gaactgaaccgtgtattaggcggcggtatagtacccggctcactggtactcgtaggtggt
gaacctggtatcggaaaaagtaccctgttcctgcagaatgcattactactcaaagacatc
actacattatatataagtggagaagaaagtgcacagcagataaaaatgagagcagacaga
ttacaggtaaaaaatgatctcttctatctgctcacagaaacatctacacaaacaatcttc
caggagataaaaaaactgcgtccgcaactcgttatcgttgactctattcagacgctgcaa
tctccttttatagaatcagctcccggcagcgtatcccagatcagggaaacaaccgccgaa
ctgcaacgcttcgcaaaagaaagtcatacccccgtattcctgatcggccatatcaccaaa
gatggttccattgccggtccgaaaatactggaacatatggttgacaccgttctccagttt
gaaggtgatcaacactatgcataccgcatacttcgtaccattaaaaaccgcttcggctct
acggcggaactgggcatctatgaaatgaccggcggcggattaagacaggtcaccaaccct
tcagaaatcctgatctcccaaagggaagatcagctgagcggtgtcgctatcgctgcgaca
atagaaggtatgcgtcctatgctcgtagaagtacaggcactcgttacccaatccgtctat
ggtacaccgcaacgtaccgctaccggatttgacttacgccgtttacaactgctgctcgcc
gtactcgaaaaacgcggcggcttccacttcggtgtcaaagacgtatttctcaatatcgcc
ggtggtatccgcgtagaagatccttctattgatctcgccgtattgtgcgcattattatcc
tcttatgaagacatccccatcagcagtaaaatctgcttcgccggtgaagtcggattaagt
ggtgagatccgtgccgtaaaccgtatagaacaacgtgttgcagaagcagaaaaactgggt
ttcgaaaagatcttcatcagtcgctacaataaaaaaggaacagatatcagcaagtttaac
attgaagtgataccggtaggcagagtggatgaagtataccgcggactattttaa
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