Chitinophaga pinensis: Cpin_0888
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Entry
Cpin_0888 CDS
T00959
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpi03032
]
Cpin_0888
03036 Chromosome and associated proteins [BR:
cpi03036
]
Cpin_0888
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_0888
DNA replication proteins [BR:
cpi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cpin_0888
Chromosome and associated proteins [BR:
cpi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Cpin_0888
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Cpin_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
TFIIA_gamma_N
Motif
Other DBs
NCBI-ProteinID:
ACU58386
UniProt:
A0A979GRD1
LinkDB
All DBs
Position
complement(1060572..1060841)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKAELIDKLAKDAGITKTQANEALDSFTKAVADTLKKGGKVTLVGFGTFSVSKRAARNG
RNPQTGQIIKIKAKKVAKFKAGKALSDKL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagccgaattaatcgacaaactggctaaagatgccggtatcactaaaacccaa
gctaacgaagcactggattctttcactaaagctgttgctgataccctgaaaaaaggtggt
aaagtaaccttagtaggtttcggtactttttctgtttctaaacgtgctgctcgtaacggt
agaaacccacagactggccagatcatcaagatcaaagctaagaaagttgctaaattcaaa
gctggtaaggctctgtccgacaagctttaa
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