KEGG   Chitinophaga pinensis: Cpin_0940
Entry
Cpin_0940         CDS       T00959                                 
Name
(GenBank) ribonuclease, Rne/Rng family
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
cpi  Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:cpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpi03019]
    Cpin_0940
   03009 Ribosome biogenesis [BR:cpi03009]
    Cpin_0940
Messenger RNA biogenesis [BR:cpi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Cpin_0940
Ribosome biogenesis [BR:cpi03009]
 Prokaryotic type
  rRNA processing factors
   Cpin_0940
SSDB
Motif
Pfam: RNase_E_G DnaJ_CXXCXGXG PIG-L AHD KID TraK_C
Other DBs
NCBI-ProteinID: ACU58438
UniProt: A0A979G0M3
LinkDB
Position
1123164..1124714
AA seq 516 aa
MNKELIINAAPTGVEIALLEDKKLVELHHESGNPNFSVGDLYLGRVKKLIPGLNAAFVDV
GFEKDAFLHYTDLSPYIRSILKFTQQAISDKTPEGFDFTKFKNEPEIVKTGKITDVLGGK
PNILVQILKEPISSKGPRLSCEISLPGRFIVLTPFNDIVAVSKKIHSSEERKRLQKIVEA
IKTPNFGVIVRTAAEGKKTAELHEDLTTLVETWKNIQANLRGAQPPQKILSEQAKTTSIL
RDLLNESFNRIVINDRNMYSDTRAYIQKIAPEKQDIVQHYHNGAPIFDHYGVTRQVKASF
GKTVNLDSGVYLIIEATEALHVIDVNSGYKSSSNNQEQNALASNLEAAAEIARQLRLRDL
GGIIIIDFIDMKLPENKKVVYEAMEKFMAQDRAKHTILPISKFGLMQITRQRVKPEVTIS
VAEDCPTCHGTGKIGASVLIIDEVEKNLQYLINHQHKGLTLRVHPIFYSYLAKGFLTSRQ
WKWYFQYKKWVKVKADSNYHLTEYRFFDANEEEIKL
NT seq 1551 nt   +upstreamnt  +downstreamnt
ttgaacaaggaacttattataaatgcggcacctactggtgtggaaatagcgttgctggaa
gataagaaactggtggaattgcatcacgaaagcggcaatcccaacttttctgtaggggat
ttatacctcgggcgggtgaaaaaattgatcccgggccttaatgcggcttttgttgatgtg
ggtttcgagaaagatgctttcttacattacacagaccttagcccatatatacgttctata
ctcaaatttacccagcaggctatttcagataaaaccccagaggggtttgactttacaaag
tttaagaatgagccggagattgtaaaaaccggcaaaatcacagatgtgctgggcggtaag
cctaacatcctggtgcagatcttaaaagaaccgatttcctccaaaggtcctcgtcttagt
tgcgaaatttctcttcccggaagattcatcgtgttaacaccctttaatgacattgtcgca
gtatctaaaaagatacactcttccgaagaaagaaaaagactacaaaaaatagtcgaagcg
atcaaaacacccaattttggtgtgatcgtacgtaccgcggcagaaggaaagaaaacggct
gaactgcatgaggacctgacaacacttgtggaaacctggaaaaatattcaggctaacctg
cgcggtgcacaacctccgcagaaaatcctgagtgaacaggccaagactaccagcatctta
cgtgatcttcttaacgagagctttaaccgaattgtgatcaatgatcgcaacatgtattct
gataccagggcctatatccaaaagattgcccctgaaaaacaggatattgtacagcattat
cacaacggcgctcctatcttcgatcattatggcgttacccgccaggtgaaagcttccttc
gggaaaacagtcaacctggacagtggcgtatacctgatcatagaagcgacagaagcttta
catgtcatcgacgttaacagcggatacaaaagctccagcaataaccaggaacagaatgcc
ctcgcatccaacctggaagctgctgcagaaatagcccgtcagttacgactccgtgacctg
ggtggtatcatcatcatcgacttcattgatatgaagttgccggagaataagaaagtagta
tacgaagccatggagaaattcatggcgcaggacagagcaaaacacaccatcctgcctatt
tcgaaattcggtctgatgcagatcacccgccaacgcgtgaaacccgaagtcactatttca
gtcgcagaagattgccctacctgtcacggtaccggtaaaatcggcgcttccgttctgatc
attgacgaagtcgaaaagaacctgcaatacctgatcaaccatcagcataaaggtcttact
ctcagggtacaccctatattttactcctacctggccaaaggattccttacctcccgccag
tggaaatggtacttccagtacaagaaatgggtcaaggttaaagctgactccaactaccat
ctgacagaatatcgcttctttgatgccaacgaggaagagatcaaattataa

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