Chitinophaga pinensis: Cpin_0995
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Entry
Cpin_0995 CDS
T00959
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpi03032
]
Cpin_0995
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_0995
Enzymes [BR:
cpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cpin_0995
DNA replication proteins [BR:
cpi03032
]
Prokaryotic type
DNA Topoisomerases
Cpin_0995
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cpin_0995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RAP
Motif
Other DBs
NCBI-ProteinID:
ACU58493
UniProt:
A0A979G0F7
LinkDB
All DBs
Position
1195990..1197051
Genome browser
AA seq
353 aa
AA seq
DB search
MDLLAEAMATAKAVKLRYVKSGTTGYSRERVKSGFRYRDQHGDIIKDEEVLKRIRGLVLP
PAWEEVWISPYANGHLQATGIDAMGRRQYRYHSTWAKVRNETKYDRLLHFGEKLPQLREH
ITAALRKKSLDKEKVTAIALSVMQETLIRVGNASYEKLYGSYGLTTLHTEHVKIDGNTAF
FKFKGKKGVMHKITLKHAQLAKLLHKVRDIPGQELFQYYEGEDHKSLDSGDINEYLKQWT
GDDFTCKDFRTWSGTVNALNLLADLTPFASAHECKQNLVQIIDSVAGKLGNTRAVCRKYY
IHPKILEAYELCELEPYLEELRAGRTEASEGGLHNDEQVLLKFMKEQKKQGKN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcttgctgaagcaatggctactgccaaagctgttaaactacgttatgtgaag
tctggtaccacgggatatagccgggaaagggttaagagtggctttcggtaccgtgatcag
catggagatattatcaaagatgaagaggtgctgaaaaggatccgcggcctggtattacct
cccgcctgggaagaggtatggatctctccatatgcaaacggacacctgcaggcaacaggt
atcgacgccatgggcagaaggcaatatcgctaccattccacctgggcaaaagtacgtaat
gaaacgaagtacgaccgcctcctacattttggggagaaactaccgcaattacgcgaacat
atcacagctgcattgcgtaaaaaaagtcttgataaagagaaagttacggcgattgcattg
agcgttatgcaggaaacgctgatcagagtagggaatgcatcttatgagaagttatacggg
tcttacggtctgactacattgcatacagaacacgtaaaaatagacggaaatacggccttt
tttaagtttaagggtaagaagggcgtcatgcataaaataacgcttaaacacgcccaatta
gccaaattattgcataaggtaagagatattcccggacaggaattatttcagtattacgaa
ggggaggaccataagagtctagactccggagatatcaacgaatacctgaaacaatggacc
ggcgatgattttacctgtaaagatttccgtacctggtcaggtactgtgaatgcactaaac
ctgctggcagatcttacgccgtttgcctctgcacatgaatgtaaacagaacctggtgcag
ataatagacagtgtagccggcaaactcggtaatacaagggccgtttgtaggaaatattac
atacatcctaagatacttgaagcgtatgaactatgtgaactggagccttacctggaagag
ttgcgggcaggaagaacggaggcatccgaaggaggtttgcataacgacgagcaggtattg
ctgaagtttatgaaggaacagaagaaacagggaaaaaattaa
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