Chitinophaga pinensis: Cpin_1021
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Entry
Cpin_1021 CDS
T00959
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpi
Chitinophaga pinensis
Pathway
cpi03420
Nucleotide excision repair
cpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cpin_1021
03430 Mismatch repair
Cpin_1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_1021
Enzymes [BR:
cpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cpin_1021
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cpin_1021
MMR (mismatch excision repair)
Other MMR factors
Cpin_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
eIF3g
Motif
Other DBs
NCBI-ProteinID:
ACU58519
UniProt:
A0A979GR28
LinkDB
All DBs
Position
1224153..1226504
Genome browser
AA seq
783 aa
AA seq
DB search
MKANYLDELNEQQRLAVAHINGPLMIVAGAGSGKTKVLTTRIAHLMRNGVDAFNILSLTF
TNKAAREMKERVEKILGGTEARNLYIGTFHSVFARLLRAEAHRLGYPNDFTIYDSDDAKS
VLKTIINEQNLDDKHYKPNLVYNRISAAKNSLMGPEEYQHDYAVQQEDMRANRPMTGKLY
DMYAKRCFKNGAMDFDDLLFKMYQLLKSFPEVLHKYQHKFKYIMIDEYQDTNPAQYEIIK
LLGAAHENICVVGDDAQSIYSFRGATIQNILQFEKDYDDAKVVKLEQNYRSTKSILNVAN
EVIANNKGQIEKNLWTDNADGEKIKLVRTMTDNEEGKFVADTIAEQKLRNHYANRDFAIL
YRTNAQSRAFEENLRRKAIPYRIFGGLSFYQRKEIKDFIAYLRIVTNPQEEESLKRIINY
PVRGIGKTTVDKCSVIANDQNITFWNVLERAREFGFKSGTLEAIEGFVIMIRSFQAMLGK
HNAYDIALQVGKSTNLVKELFNDKTTEGLARYENIQELLNSIKEFTETPTEDGELLEAEK
SLGSYLQQITLLTDADKGNDEDSDVVKLMTIHAAKGLEFPVVFSVGLEENLFPSGLSINS
REELEEERRLFYVVITRAKSRLFLTYANSRYRFGQLVNNESSRFLEEMPEKYIDRSYAGG
SGVNRSPINNGGGLWGNSGGGNMFDRMQKKTPQSSQQPAGPRPAPKPMQTAMPSTHVPSP
NFTPDDPATMEAGMEVEHQKFGFGTITTMDGPMNNRVATVNFPKAGGEKKIMLNYARLMI
VKK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaattatttagatgaactgaacgagcagcaacggctggcagtagcgcacatt
aatggtccgctaatgatcgtggcaggcgccggctccggtaaaacgaaagtgttgaccacc
cgtatcgctcacctcatgcgtaacggggtagacgcgtttaatatcctttcgctgacattt
acaaataaggcagcccgtgaaatgaaggaacgtgtggaaaagatcctcggcggtacagaa
gcacgtaacctctacatcggcaccttccactccgtgtttgccagactgctcagagcagaa
gcacaccggctcggttaccccaacgactttaccatctacgattctgacgatgcgaaaagt
gtgcttaaaaccatcataaacgagcagaatctggacgataagcactacaagcctaatttg
gtatataaccgcatttctgcggctaaaaacagccttatgggccctgaagagtatcagcat
gactatgcggtacagcaggaagatatgcgcgctaacaggccgatgaccggtaagctgtac
gatatgtacgccaaacgctgttttaagaacggcgccatggactttgacgacctgctcttc
aaaatgtaccagctgctgaaaagcttcccggaagtactgcacaaataccagcataagttc
aaatatatcatgatcgatgagtaccaggataccaacccggctcagtacgagatcatcaaa
ctactgggcgctgcgcatgaaaacatctgcgtggtaggtgacgatgcacagagtatctat
tccttccgcggtgccaccatacagaacatcctccagtttgaaaaagactatgatgatgcg
aaagtggtaaaactggagcagaactaccgttctaccaagtccatccttaacgtagccaac
gaggtgattgcgaataataagggacagatcgaaaagaacctctggacagataacgcagac
ggtgaaaagatcaagctggtacgtaccatgacggataatgaggaaggtaagttcgtagca
gataccattgcagagcaaaagctccgcaatcactacgccaacagagacttcgccatcctc
taccgcacgaacgcgcaaagccgtgcatttgaggaaaacctgcgccgtaaggccatccct
taccgcatcttcggtggcttgtccttctatcagcgtaaagaaatcaaagactttatcgct
tacctgcgcattgtgaccaatccacaggaagaagaaagcctgaaacgtatcatcaactat
cctgtacgcggcattggtaaaacaaccgttgataaatgctccgtgattgccaatgaccag
aatatcactttctggaatgtactggaaagagcgcgtgaattcggattcaagagcggtaca
ctggaagcgatcgaagggtttgtgatcatgatccgcagtttccaggcaatgctgggtaaa
cataatgcttacgacattgctttacaggtgggtaaatctaccaatctcgtaaaggaactg
ttcaacgataaaacaacagagggcctggcccgctacgaaaatatccaggagttgctgaac
tccatcaaggaattcaccgaaacgcctacggaagacggtgaactgctggaagcagaaaaa
tccctgggtagctatctgcagcagatcacattgctgacagatgccgataaaggcaacgat
gaagacagtgatgtggtgaaactgatgaccatccacgcggcaaaaggactggaattcccg
gtagtattctccgtaggactggaggaaaacctcttcccaagtggtctttccatcaattca
agagaagaactggaggaagagcgccgtttgttctatgtggtgatcacccgtgcgaaatcc
cgtctgttcctgacatacgccaacagccgttatcgcttcggacagctggtgaataatgaa
tccagccgtttcctggaagagatgccggaaaaatacattgaccgcagctatgcaggcggc
agtggtgtaaaccgtagtccgattaacaacggcggcggtctatggggtaatagcggagga
ggcaacatgtttgaccgtatgcagaagaaaacgccgcagtccagtcagcaacctgctggt
ccgcgtccggcgccaaaaccgatgcagacggcgatgccaagcacacacgttccttctcct
aacttcacaccggacgatccggctaccatggaagccggtatggaagtcgagcaccagaaa
ttcggtttcggtaccattaccacgatggacggccccatgaataaccgggtggctaccgtc
aacttcccgaaagcaggcggtgaaaagaagatcatgctgaactacgcccgcctgatgatc
gtaaaaaaataa
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