Chitinophaga pinensis: Cpin_1052
Help
Entry
Cpin_1052 CDS
T00959
Name
(GenBank) surface antigen variable number repeat protein
KO
K07277
outer membrane protein insertion porin family
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cpi03029
]
Cpin_1052
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_1052
Mitochondrial biogenesis [BR:
cpi03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Cpin_1052
Transporters [BR:
cpi02000
]
Other transporters
Pores ion channels [TC:
1
]
Cpin_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Motif
Other DBs
NCBI-ProteinID:
ACU58550
UniProt:
A0A979GTD7
LinkDB
All DBs
Position
1259652..1262396
Genome browser
AA seq
914 aa
AA seq
DB search
MKKLFPKSLLAIVLCCSAGIRVSAQIRDTSVTPVPTPDQQAAGLNLSGPLQAQPYEIADI
TIVGTQYLDKSLLISLSGLNVGDKVVYPGGDQFAKAIQSLWGQRLFANVAIYVTKIEDGK
IWLEIELQERPRLNNFVFRGVKKSETEELIKKAGLRKGSVVTESMKQNAIGVISKHYGDK
GFRNATVNITERTDTSQVNASDLVITVVKGGKAKVNDIQIVGNDNIDDTRVKKKMKGTKE
RTRFTLYPDIESVYEDSTELQENYWKTFGFLYPSRTMEQLDPYFRFKLFSSAKFNENKYA
EDKEKVIAYYNTQGYRDAVLVRDTTYRAHNGGVNVAMQISEGKKYYFGNITWKGNSRYND
SLLTRVLGIRKGDTYNQELLQKRLLSSEGGDIGGMYMDFGYLFFRADPVEVAIHGDTIDY
EIRISEGPQATIKEVRIAGNEKTNEHVIRRELRTLPGEKFSRTDLIRSNREIANLGFFNP
EKIGMDPIPNIQDGTVDINYTVEEKANDQLELSAGWGGYIGLTGTLGVTFNNFSLRNILR
KETWDPLPSGDGQKLSVRVSSNGKAYRSYNFSFTEPWLGGKKRNQFSVSFYSSYQNPNAY
SAYIYGSTLSNNAYFKVLGGSVSLGKQLKWPDDFFTLIYSLNYQQYKLKNYNYFNIPGFS
SGTSNNVNIKLTLARSSVNQQIYPSSGSNFLLSGQFTPPYSIFNPNRDYKLESIQDQFNL
IEYQKYRFNAEWYVPLSRPKGSDNKVFVLKVAAKFGYIGRYNNRTTLSPFGRFELGGDGL
SNFAIYDRDIISQRGYPVYYTSDPRMNSETGQPTGYEGFTVFNKYVMELRYPFSLNPSST
IFGLAFVEAANGYRDVRDFNPFRLRRSAGLGMRFYLPMFGLLGFDYGIGFDRLQSGNGLK
DAAKFTFMLGFEPE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatttcctaagagcctactggccatagtattatgttgcagtgccggcatt
cgtgtgtccgcccagatcagggacactagtgttacgccggttccaacacctgaccagcaa
gcggcgggattgaatttatcaggtccgttacaggcacagccttacgaaattgctgacatt
accattgtagggacgcaatacctggataaatctctgctgatttccctgtcaggcctcaat
gtcggtgataaagtggtttatcccggcggtgaccagttcgcaaaggccatccagagtctc
tggggccagcgtttgtttgccaacgttgctatttatgttaccaaaatagaagacgggaag
atttggctggaaatagaactccaggaacgccctcgtctgaataacttcgttttcagaggt
gttaaaaagtctgaaacagaagaactgataaaaaaagccggcctgcgtaaaggatccgtt
gtaaccgagagcatgaaacagaatgcaatcggcgtgatctctaaacactatggcgataaa
ggcttccgcaatgctactgttaacattaccgaaagaacagatacctcccaggtaaatgct
tccgacctggtaattaccgtagtaaaaggtggtaaagcaaaagtgaacgatatccagatc
gtgggtaacgacaatattgacgatacaagagtgaagaagaaaatgaaaggtaccaaagag
cgtacccgcttcactttatatccggatatcgagtcggtatatgaagattcaaccgaactg
caggaaaactactggaaaaccttcggtttcctgtatccttcccgcactatggaacaactg
gatccgtatttccgtttcaaattattctcttctgccaagttcaatgagaacaaatacgca
gaagacaaagagaaagtaatcgcttattataacacacagggttaccgtgacgccgttctg
gtgagagatactacttatcgtgcgcacaatggtggtgtaaacgtagccatgcagatcagc
gagggtaagaaatattacttcggtaacattacctggaaaggtaacagccgttataacgac
tccctgctgacccgtgtactcggtatcagaaaaggagatacctacaaccaggaactgctg
cagaaacgcttattgtcttctgaaggtggcgacatcggtggtatgtacatggacttcggt
tacctgttcttccgtgctgaccctgtagaggtggcgatccatggcgataccatcgactat
gagatccgtatctctgaaggtccgcaggcaaccatcaaagaagtacgtattgccggtaac
gaaaaaaccaacgaacacgtaatccgtcgtgagttgcgtacgctgcctggtgagaaattc
agccgtactgacctgatccgttccaaccgcgagatcgcgaacctcggtttcttcaaccct
gagaagatcggtatggaccctatcccgaacatccaggatggtaccgtggatatcaactac
actgtagaagagaaagcgaatgaccagctggaattatctgcaggatggggtggttacatc
ggtctgaccggtactttgggtgtgaccttcaacaacttctccctgcgtaacattttaaga
aaggaaacatgggatccattaccaagtggtgacggccagaaattatctgtgcgtgtatca
tccaacggtaaagcctatcgctcctataacttctcatttaccgagccatggttaggtggt
aaaaagcgtaaccagttctctgtcagcttctacagcagctaccagaacccgaacgcttat
tctgcttatatatatggtagcaccctgtctaacaatgcttacttcaaagtattgggtggt
tccgtatccctcggtaaacagctgaaatggcctgatgacttcttcacgctgatctactcc
ctgaactatcagcagtataaactgaagaactataactatttcaatattcctggtttctcc
agcggtacttccaataacgtcaacattaaactgaccctcgcccgttcatctgtgaaccag
cagatctatccgagcagtggttctaacttcctgttgtccggacagttcacgcctccttac
tccatatttaatcctaacagggattacaaactggagtctattcaggatcagtttaacctg
attgaataccagaaatatcgtttcaacgcggagtggtacgttccattgagcagacctaaa
ggttctgataacaaagtgttcgtactgaaagtagccgctaaattcggttacatcggccgc
tacaacaaccgcacaacattgtctccatttggtcgttttgagctgggtggcgatggtctg
agtaacttcgcgatctatgaccgtgatatcatctcccagagaggttatccggtatactat
acctcggatcctaggatgaactcagaaaccggacaaccaacaggttatgaaggtttcacc
gtgttcaacaaatatgtgatggagttacgttatccgttcagtctgaacccaagctctacc
atctttggtctggcgttcgtggaggcagccaatggttaccgcgatgtaagagacttcaat
ccgttcagattacgtcgttcagcaggtctcggtatgcgtttctacctgccgatgtttggt
ctgcttggatttgactatggtatcggtttcgaccgtctgcagtccggcaatggtctgaaa
gatgctgctaagttcaccttcatgctgggcttcgaaccggaataa
DBGET
integrated database retrieval system
