Chitinophaga pinensis: Cpin_1326
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Entry
Cpin_1326 CDS
T00959
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cpin_1326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_1326
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_1326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
UPF0122
KORA
Motif
Other DBs
NCBI-ProteinID:
ACU58824
UniProt:
A0A979G0Z3
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All DBs
Position
1583660..1584535
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AA seq
291 aa
AA seq
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MSMRQLKITKSITNRESQSLEKYLQEIGKVDLITPEEEVNLAIRIKQGDQRALEKLTKAN
LRFVVSVAKQYQNQGLSLSDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQAL
AEQSRIVRLPLNKVGLSNKISKAYSQLEQEFEREPSPDELATILEINTEEVEATLGVAAR
HVSMDAPFIDGEDNSLLDVLANPNAVNADEELDHHDSLRREIERSLSTLTDRQKDVIILY
FGIAVEHPMSLEDIGEKFGLTRERVRQIKDKAITKLRTTSRSKLLRNYLGS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcgccaactcaaaatcacgaaatccatcaccaatagggagtcccaatctctg
gagaaatacttgcaggaaattgggaaagtggatttaattacaccggaggaagaggtgaac
cttgctatacgcattaagcagggcgaccagagagctcttgagaaactgacgaaagcaaac
ctccgttttgtggtgtctgttgccaaacagtatcagaatcagggattatcgctcagtgat
ctgatcaatgagggaaatctcggcctgatcaaagcagcacagcgttttgatgagacccgt
ggttttaagttcatttcttacgccgtttggtggatccgtcaatcgattcttcaggcattg
gccgaacagagtcgtatcgtaagactgccgcttaacaaagtggggctgagcaacaagatc
agcaaggcttactctcagctggaacaggaatttgaaagagagccatctcctgacgaactc
gctaccattctagagatcaatacggaagaagtagaagctactttaggcgttgccgcccgt
cacgtatctatggatgcaccgtttatcgatggtgaagacaactccctgctggatgtactg
gcaaatccgaatgctgtgaacgcagacgaagaactggatcaccacgattccctgcgccgc
gaaatagaacgttctttatctacactcactgacaggcagaaagatgtgatcatcctttac
ttcggtattgcagttgaacatccgatgtccctggaagatatcggtgagaaatttggtctg
acccgcgaacgtgttcgccagatcaaggataaagcaatcactaaactgcgtactacttct
cgcagcaaactgctgagaaattacctgggaagttga
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