Chitinophaga pinensis: Cpin_1608
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Entry
Cpin_1608 CDS
T00959
Name
(GenBank) collagen triple helix repeat protein
Organism
cpi
Chitinophaga pinensis
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ACU59104
UniProt:
A0A979GS16
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Position
complement(1952084..1955389)
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AA seq
1101 aa
AA seq
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MKKLYLLIILMAAVCAGAYAQNGLAGTNYQAVVRNTNGTVVANKDISVRISVLGGSAAGP
VQYEETHEVKTSTLGLFNLQIGKGNPTTGTFAGVPWANANQYLKVEVNTGSGFVTLGTTE
LLSVPYALYAANGTPGPAGPTGPQGPAGPTGAKGDAGATGPAGAKGDTGPAGAAGPQGAP
GVAGPVGPVGPAGAKGDAGAAGPQGAPGVAGPVGPVGPAGAKGDAGVAGPQGPVGAIGPV
GPAGAAGPQGNPGPVGPIGPIGPVGPAGATGPQGDPGVAGPAGPVGPIGPAGATGPQGDA
GVAGPIGPVGPAGAAGVAGPAGPQGPVGPVGPAGPAGEINGAAAGGDLSGTYPNPNVVRL
QNIPVSATAPLAGQILRYDGTNWLPSVAGGGFTLPYVTVENNASTLFSLTNDGDGTSIEG
VNNTTTSSIAAIRGIVNSTAPGGFSSAVRGINNGTGGLGIGVWGSQAGSGWGVYGVTPNG
LGVYGNSSANGYGVFANSNSGIGLNATSVNGIAASININNNANNNNALNVTSVGNGTVVN
VSTTGNGTGVLSSAGAGFGVHGITSEQTSAGIVGDNNGAGEAIVGRTTSDIAGAVVGRND
GGGYGVRGFVATSTANTGIGVYGQVGINNSTGMAGKFENFNQDNTEANILDVVSNSNGNI
PDNTLGNASSFLLDNNNSVGAAVRAEVNTIFGNFGAAGVFGISSGTGGRAGLFYASNPAG
NGASLIALTDGNGNAITANAGKDGNGVETNIDGAGTALYAWVPTFSEGRAGRFEIFNEDN
ENPVITVKTVGNGTAGNFLVDRVTGTSPAVKGEVNSQFANFGTAGIYGVSSGTGGYAGLF
YASNAAGNGPSVLALTDGNGNAITANAGGNGDGIEASCDGGGNAVSGFVPNFGSGRAGRF
ANFNNSNGLPVVHITTTGTGSTLLVNHQGASGNIAQFQSASGNVARINKAGRGFFNGGTQ
NSGADVAEAFDVKGHVNQYAPGDVLVIAEDADRTVALSSKPYSTLVAGVYATKPGVLLTE
ENIDDELADKVPMGVIGVIPTKVCGEGGAIRRGDLLVTSSKAGHAMKADLDKVKPGQVIG
KALETFDGQDTGLIKVLVNVR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatatctactgatcatattaatggctgctgtctgtgcgggcgcctatgcc
cagaacggactggcgggtaccaattaccaggcggtagtccgcaataccaatggtacggtt
gtcgccaataaagacatctctgttcgtatctccgttcttggcggttctgctgccggtccg
gtgcaatatgaagaaacacatgaagtgaaaaccagcacactgggactcttcaatctgcag
atcggtaagggtaaccctacaaccggcacctttgcaggtgtgccctgggctaatgctaac
caatatctgaaagtggaggtaaataccggcagtggctttgttaccctcggtaccactgaa
ctgctgagtgttccctatgcattatatgctgcgaatggtactcccggcccggctggcccc
acaggacctcagggtccggctggcccaactggtgcaaaaggtgatgccggcgcaaccgga
ccagctggtgccaaaggagatactggtccggctggagcagctggccctcagggagcacca
ggtgtagcaggtccggtaggacctgtaggaccggcaggcgctaaaggagatgcaggagca
gctggcccccagggagcgccaggtgtagcaggtccagttggtcctgtaggaccggcgggt
gctaaaggagatgcaggagtcgctggtcctcaaggtccagttggcgcaattggtccggta
ggacccgcaggtgcagcaggtccacaaggtaatccaggcccggtaggccccatcggacca
ataggtccggtaggtccggcaggtgcaacaggaccacagggcgatccgggtgtagcagga
ccagcgggaccagtaggaccgataggaccagcaggcgccacaggcccacaaggtgatgca
ggtgtagccggaccaataggaccggtaggaccggcgggtgcagctggcgtagcaggccct
gcaggtccacaaggtcctgtaggaccagtgggaccggcagggccggcgggtgagatcaat
ggtgcagcagcaggcggtgatctgagtggtacctatccgaatccgaatgtagtacggtta
cagaatatccccgtatcagcaacagctcctctggccggacagatcctccggtatgatggt
accaactggctgccaagtgttgccggtggcggattcacgctcccatatgtcactgtggaa
aacaatgcttctaccctgttctcactgacaaacgatggagatggtacttctatagaaggg
gtaaataacaccaccacttccagtattgcagctatacgtggtattgtaaacagtactgct
ccaggtggattttccagtgcagtaagaggtattaacaatggtaccggcggactgggtatc
ggcgtatggggttctcaggccggatctggctggggcgtatatggtgttactcccaatggt
cttggtgtatatggtaactcttccgccaatggttacggcgtatttgccaacagtaacagc
ggtattggtctgaatgccacttctgtaaatggcatcgcagccagtattaacattaataat
aacgccaataataacaatgcactgaacgtcacttctgttggtaatggtactgttgtcaat
gtcagcacaaccggtaatggaacaggtgtattaagtagtgcaggtgcaggttttggcgta
catggcattacctccgaacaaacatctgccggtattgtcggtgataataacggagccggg
gaagcgatcgtaggtcgtacaacatccgatattgcaggtgccgtagtcggccgtaatgat
ggcggaggatatggagtaagaggttttgttgctaccagcactgccaacactggtatcggt
gtatatggccaggtaggtattaataacagtaccggtatggcgggtaaatttgaaaacttc
aaccaggacaatacagaagcaaatatcctggacgtagtgagtaacagtaacggtaatatt
cctgacaataccctgggtaatgcctcttccttcctgcttgacaacaacaacagcgtaggt
gctgcggtgagagcagaagtaaataccatttttggcaactttggtgcagcaggtgtattc
ggtatttcttccggtactggtggtcgtgcgggtctgttctatgcctccaatccggctggt
aatggcgcttcgctgatcgcgctgacggatggtaacggtaatgcgatcactgcgaatgca
ggcaaagatggcaatggtgttgaaaccaatatcgatggagcaggtactgccctatatgca
tgggtgcctactttcagtgaaggccgtgcgggaaggttcgaaatctttaacgaggataat
gaaaatccggtgatcacagtgaaaactgtcggcaatggtactgcgggcaatttcctggtt
gacagagtaaccggtacttctccagcggtaaaaggtgaagtgaactctcaattcgccaac
tttggaacagccggtatatacggcgtgtcgtctggtacaggtggctatgcagggcttttt
tatgcatccaacgcggcaggtaatggtccgtcggtactggcacttacagacggtaatggc
aatgctatcactgccaatgccggtggcaacggcgatggtatagaagccagttgcgacggt
ggtggtaatgctgtttccggatttgtccccaattttggtagtggcagagcaggaagattc
gcaaatttcaacaattcgaacggtctgcctgttgtacatatcacgaccactggtaccggc
agtacattattggtcaaccatcagggggcatccggtaacatcgcacagttccagagtgcc
agcggtaacgttgcgcgtatcaacaaagcaggtcgcggattctttaacggtggcacacaa
aacagtggtgcggacgttgcagaagcatttgatgtaaaaggtcatgtgaatcagtatgca
ccaggtgatgtactggtgatcgctgaggacgcagacagaacagttgcattgtcttccaag
ccatattctaccctggtagcaggtgtatacgccactaaaccgggtgtattattaacagaa
gaaaatattgacgatgaactggcagataaagtgccaatgggtgtgatcggtgttattccg
actaaagtatgtggagaagggggcgctatccgcaggggcgatctgctggtgacttccagc
aaagcgggtcacgccatgaaagctgatctggataaagtaaaaccaggtcaggtgattgga
aaagcactggaaacttttgatggccaggatacagggctgatcaaagtacttgtaaacgta
agataa
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