Chitinophaga pinensis: Cpin_2170
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Entry
Cpin_2170 CDS
T00959
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cpi
Chitinophaga pinensis
Pathway
cpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cpin_2170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_2170
Enzymes [BR:
cpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cpin_2170
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpin_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Nuc_H_symport
Motif
Other DBs
NCBI-ProteinID:
ACU59662
UniProt:
A0A979GNL0
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All DBs
Position
2655737..2658928
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AA seq
1063 aa
AA seq
DB search
MALYLRVSNSLENLSMGLAQTLKASNSQVFEQHLIVTQTEGMNNWLKLQLAEYLGIAANC
RFLKPNDLIHQIYFLMDGQYSEMLSGRNLTWLLYKLLGEDIFRETYPAVATYYHTTEPDS
DLKRMALAERTADLFDQYQIYRPEMINEWNAPPEDPFAKIDWQQYLWTEAKKVSGHALPD
KTIIGQHILDMLKNPDHQETLAHRMNTVHLFGLSIITAYHVQILHELSSFIDIYFHIINP
SPELYWFDDKSEKQQARWRLKGRPIHESDTAGNPLLMGWGRVVQDTFGLFFKYDAFINAY
ESEGLVEPQPDTLLNKVQHDIFLNANEQRHPIFPEDVEDGSITINNCYTVAREVEVLYNY
LVHLVDKKRETLSPRDIVVMVRDIDVYAPYIKAIFNNAPYKFRYTIADESYADSDNLFNA
LHAILRLNEDNFKAEEVLQLLDSSYVRKRFGINNVPLIRHVVDEANIRFGIHGAKEDETY
LVSWKYGIKRIMYGICMSGDQEYGKGEEGFFPLDILEGSDSLEVIRFCHFAEVLISAIED
RKKERSISGWVEYIEGILHNMVYEPEEEIDEDYNTLMQQLSDYNLLNEYMSDTVAFDVFS
HSFLQTLTGTTRTGLFVNGGITFCSLIPMRSIPFRVVAMLGLDYDKFPRREQPIGFNLME
KNKQRGDRNVKDNDKHLFLETVLSARQYLYISYVGQSAKDNSRMPPSALVDELLDYIESG
CEDAEGVRNRLVTRQPLQGFSRKYGQGDERLYSYLNTAVPERIITRADKAMEQPSIEEID
LDELVRFFKNPFKAYYNKVLGIYYNDEQVLLNETEIFHLDSLQKWSLKNELLQMDTNAIA
NMKIRLVKTGRLPLKNMAYVALQQIEAEVQPVREKFRACINGAEEQSVQVNLDIEGTLLK
GTINGVFDGKLVQVSWSKREDKYLMEAYIRYLAGRAAGVLDGMCFISGASKREAFEAIPL
AQQEALRRLTALVKIFREGFEKITPFYPDFDIKPADVAGLDFSKFSKKVDKALDKGDDIT
IDPYISREYENGFFKDETMLDTYKVICSHLLVPLAEIIPGYYN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcactatatctgagagtgtctaattccctggagaacctctccatgggattggcacag
acactgaaagcttccaacagccaggtgtttgaacaacacctgatcgtcacacagacggaa
gggatgaacaactggttgaaattacagctggcagaatacctgggtattgctgccaattgc
cgttttctcaaaccgaatgatctgatccatcagatctatttcctgatggatggtcagtat
tcggaaatgctttccggcagaaatcttacctggctgttgtacaaattgctgggagaagat
atcttccgtgaaacctatcctgccgtcgctacttattaccatacaacagaaccggatagc
gatctgaaaagaatggccctggcagaaaggacagctgacctttttgaccagtaccagatc
tatcgtccggagatgatcaatgaatggaatgcgccaccggaagacccgtttgcaaagatt
gactggcaacaatatctgtggacagaagccaagaaagtatctggtcatgcgctgcctgat
aaaaccattatcggacagcacatcctggatatgctgaagaatcctgatcaccaggagacg
ctggcacaccggatgaataccgtacatctgttcggtctctccatcatcacagcttatcac
gtgcagatcctgcatgaactgtcttccttcattgatatctatttccatatcatcaacccc
tctccggaactttactggtttgatgataagagtgagaaacaacaggcacgctggcgattg
aaaggtcgtcctatccacgaatcggatacagccggtaatccgttgttgatgggatggggt
agggtcgtacaggatactttcggcctgttcttcaaatatgatgcttttatcaacgcctac
gaaagcgaaggactggtagagccacaaccggataccttgctcaacaaagtacagcacgat
atctttcttaatgccaatgagcaacggcatccgatcttcccggaagatgtggaagatgga
tctatcacgatcaacaactgttacacggttgcccgtgaggtagaagtcctgtacaactat
ctggtacatctcgtagataaaaaaagagaaaccttatctccccgtgatatcgttgtcatg
gtgagagatattgacgtatatgcgccttatatcaaggcgatcttcaacaatgccccttac
aagttccggtatacgatcgcggatgaaagctatgcggacagcgataacctgttcaatgcc
ctgcacgccatcctgcgattgaatgaagacaattttaaggcggaggaagtgctgcagtta
ctggattcttcctatgtccgcaaacgttttggtatcaacaacgtaccattgatccggcat
gttgttgacgaagcaaatatccgctttggtattcacggggctaaagaagatgaaacctat
cttgtcagctggaaatatggtatcaaacgtatcatgtatggtatctgtatgagcggcgat
caggaatatggtaaaggagaggaagggttcttcccgctggatatactggaagggagtgat
agtctggaagtgatccgattctgtcattttgccgaagtactgatctctgccatagaagat
cgtaagaaagaacgtagtatcagtggctgggtagagtatatcgagggaatattgcacaat
atggtctatgaaccggaagaggaaatagacgaagactataatacactcatgcagcagttg
tcggattacaacctgctgaatgaatatatgagcgatacagtggcttttgacgtgttcagt
catagcttcctgcaaacactgacgggtactacccgtacaggtttgtttgtaaacggaggg
atcactttctgttccctgatcccgatgcgtagtattcccttcagggtagtggcgatgctg
ggactggactatgataagtttccccgccgggaacagccgatcggctttaacctgatggag
aaaaacaaacagcggggcgatcgtaatgtaaaggataacgataaacacctgttcctggaa
acggtgctttctgcacggcaatacctgtatatcagttacgtcggacaaagcgccaaggat
aacagtcgtatgccgccttctgcattagtggatgaactgctggattatatagaatccggt
tgtgaggatgccgagggagtcaggaaccgccttgttaccagacagcctttacagggcttt
agcagaaaatacggacagggtgatgaacggctgtacagttatctgaataccgctgtgccg
gagcgtatcattacccgtgctgataaggcgatggaacaaccatccattgaggaaattgac
ctggatgaactggtccgtttctttaagaatccttttaaagcttactataacaaagtactg
gggatctattataacgacgaacaggtgctgttgaatgaaacagagatcttccacctggat
agtttgcagaaatggagcctgaagaatgaattgttgcagatggataccaatgccattgcc
aacatgaagatccgcctggtgaagacgggacggctgccactgaagaatatggcttatgtg
gctttgcagcagatagaagcagaggtacagccggtacgcgagaaattccgtgcctgtatc
aatggggcggaagaacaatccgtacaggtgaatctggatatagaaggcaccttgctgaaa
ggaactattaacggtgtattcgatggtaagctggtacaggtatcctggtctaaaagagag
gacaaatacctgatggaggcttatatccggtaccttgccggacgggcggccggtgtgctg
gacggaatgtgctttatctcgggagccagcaaaagagaagcctttgaggcgattcccctg
gcacaacaggaagcattacgaagactgacggcattagtaaagattttcagagaaggcttt
gagaagattacgccgttttatcctgactttgacatcaaaccggcagatgtggccggactg
gatttcagtaaattcagtaaaaaggtggataaggccctggataaaggggatgacatcacc
attgatccatatatctcccgggagtatgaaaatggtttctttaaagatgaaacgatgctg
gatacttataaagtgatttgcagtcatctgctggtaccgctggcggaaataattccaggt
tattacaattaa
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