Chitinophaga pinensis: Cpin_2855
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Entry
Cpin_2855 CDS
T00959
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_2855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_2855
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_2855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_10
Sigma70_ECF
Bac_DNA_binding
GerE
HU-CCDC81_euk_2
HTH_Crp_2
Sigma70_r3
HTH_24
HTH_ParB
MarR_2
KORA
Motif
Other DBs
NCBI-ProteinID:
ACU60334
UniProt:
A0A979GTT9
LinkDB
All DBs
Position
3528681..3529265
Genome browser
AA seq
194 aa
AA seq
DB search
MGYGQYTDEELLQGLQQSKKGAYNEIYNRYWKRMLIVALNHSEDDYTAKDIVQEVFIDLW
EKRNSYEIRNLAAYLATAVKFQVFKYYRKEQRRALLAKENYVFDDRYEEEGQLHARFLKD
MIDGIVEELPEKCRLVFHYSRNLGLKNEEIAERTGITKKTVENTLNRALRIIRGKLRNHG
IPLLTIAQILLLRK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgggatacggacaatacacagatgaagaactgttgcaaggccttcaacaaagtaaaaaa
ggcgcctataacgagatttacaacaggtattggaagagaatgctcattgtcgcattaaat
cacagtgaggacgattatactgccaaagacattgtgcaggaggtgttcattgacctctgg
gagaagcgtaatagctacgagatccggaatctggctgcttatctggccactgccgttaaa
ttccaggtatttaaatattaccggaaggagcagcgtcgtgcactgctcgcaaaggaaaac
tacgtttttgacgatcgttatgaagaggaagggcaattacatgcccgctttttaaaagat
atgattgacggcattgtagaagaattgccggaaaaatgccgcctggtattccattacagc
cggaatctggggcttaaaaatgaggaaatcgccgaaaggaccggcatcaccaagaaaacg
gtggaaaatacattaaacagggcattgcgcattatccgtggtaaactgagaaaccatggt
atcccattactgacgatcgcccagatcttattgctccgaaaataa
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