Chitinophaga pinensis: Cpin_3121
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Entry
Cpin_3121 CDS
T00959
Name
(GenBank) transcriptional regulator, LuxR family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_3121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_3121
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_3121
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
Sigma70_ECF
GMT-wHTH
HTH_10
PAS_5
HTH_24
GEMIN8
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ACU60589
UniProt:
A0A979GU71
LinkDB
All DBs
Position
3840246..3840788
Genome browser
AA seq
180 aa
AA seq
DB search
MSYSVLEDNELLNRVRLSDAKAFDEIYLRYWRKLYALAFYHLKDSEAAEDIVQEIFTSLW
AARERSDIKYLYTYLATATKYAVFHHFAQPSNSTASLEELLSLPVEQPSAESRLLQDEIN
REINRLPEKCRLVFHYSREEGLGNKNISEKLNISTKAVEKHITRALRQLRVQLKHMVWFL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacagcgtattggaggacaatgaactattgaacagggtcaggctttctgacgca
aaagccttcgacgaaatttaccttcgctactggcgtaaattatatgcattggcgttttac
catctgaaagatagtgaggcagcagaagatattgtccaggagatatttacaagcctctgg
gctgcccgcgaacgctccgatattaaatacctgtatacctatctcgctacggctaccaaa
tatgccgtttttcatcattttgcccagccatccaacagtactgcttccctggaagagctc
ttgtcattgccggtagagcagccttccgccgaaagcagattgttacaggatgagatcaac
cgggaaattaaccgtttaccggaaaaatgtcgcctcgtgttccactacagcagggaagaa
ggactgggaaataaaaatatctccgagaaactgaacatctccacaaaagcggtcgaaaag
catattacgagggcgctccgtcagttacgtgtacaactgaaacacatggtctggttcctc
tga
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integrated database retrieval system
