Chitinophaga pinensis: Cpin_3213
Help
Entry
Cpin_3213 CDS
T00959
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_3213
Transporters [BR:
cpi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cpin_3213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
SusD-like
Motif
Other DBs
NCBI-ProteinID:
ACU60680
UniProt:
A0A979GWS9
LinkDB
All DBs
Position
complement(3964141..3965673)
Genome browser
AA seq
510 aa
AA seq
DB search
MKYWDIKLGKFTLGKYETLLAETAKHFSVSKYLFFPCVLLIIVSLTSCSKFVEVNPPITN
INGENVYNENGTAIAVLTGIYVNMSKADVNFASGWLTNTCFTTGLTGDELDLWDKNNTYY
AQYYYNNISPQETTWGNVYTMIFIANSAIERLPNGKYLTSEVKNQLLGEAKFIRALSYFY
LFNTYGDIPLTTTTDYKVNSLLPRSPKKDVYDQIVRDLIDAQQLLKDNFLSKDGVSITTE
RIRPCKWAATALLARVYLYLEKYNEAEQQASDIIANTSLFELVDLNSVFVMNNKEAIWQL
QPVGIPGDKTANTREGQVFKLLPPWPDFGGPAYLTDNFVKSFEANDLRRDNWTNSIVVNG
KKFAFPYKYKIGLEEEPTKEYSTVLRLGEQYLIRAEARIQQGKLADGISDLNVIRMRATN
VNADPADQLPQLSLTLSKNEALLAVENERKHELFTEWGHRWFDLKRTGRIDQVLPLVKSG
WQSTDQLFPLPANEVNGNPNLVGHQNPGYN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattgggatataaaattgggtaaatttacattaggtaaatatgaaacgttgtta
gctgaaaccgcaaagcattttagtgtaagcaaatatcttttctttccctgcgtgctgtta
attattgtaagtctgactagttgttccaaatttgtggaagttaatcctccaataacaaac
ataaatggtgaaaacgtatataatgaaaacggcaccgccatagctgtcctaacaggaatt
tatgtaaacatgagcaaagctgatgtaaactttgcttctggttggttaactaacacttgc
tttaccacaggcctaacaggggatgaattagacttatgggataaaaacaacacctattat
gcacaatattattataacaacatatcaccccaagaaactacatggggtaatgtttatacc
atgatatttattgctaattcagcaatagaacggctaccaaatgggaaatacctaacatct
gaagtaaaaaatcaattattaggagaagcaaagtttatccgcgcattaagttatttctac
ttatttaatacttacggcgatattccacttacaacaacaacagattataaggtaaatagc
ctcctaccccgatctcctaaaaaagatgtatatgaccaaattgtgagagaccttatagat
gcccagcaattgttaaaagataattttctttcaaaagacggagtgagtataacaactgaa
agaataagaccttgcaaatgggctgctactgctttattagcacgtgtatatctttatctt
gagaagtataatgaggcagagcaacaggcatctgatattattgcaaatacctccttgttt
gaattggttgatttaaactcagtttttgtaatgaataataaagaggcaatatggcaattg
cagccggtaggcatccctggtgataaaacagctaatacacgggaaggccaagtatttaag
ctactccccccttggcctgatttcggcgggcctgcatatttaactgataattttgtaaaa
agttttgaagcaaatgacctaaggagagataactggacaaatagtattgtcgttaatgga
aaaaaattcgcttttccgtataaatacaaaattgggttggaggaagaaccaacaaaagaa
tactcaactgtattgaggttaggagaacaatatttgataagggcagaagcaaggattcaa
cagggaaaactagccgacggcatctcagatttgaatgttattcgcatgcgtgctactaat
gtaaatgctgatccggcagatcaacttcctcaactttctttgactttatctaaaaacgaa
gcattgctggctgttgaaaacgaaagaaaacatgaattgtttaccgaatggggacatcga
tggtttgatctaaaaagaacaggacgtatagaccaagtgctgccactggttaagtcaggc
tggcaatctacagaccaactctttccattaccagctaatgaggttaacgggaatcccaat
ttagtaggtcaccagaatccaggatataattga
DBGET
integrated database retrieval system