Chitinophaga pinensis: Cpin_4307
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Entry
Cpin_4307 CDS
T00959
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K12146
hydrogenase-4 transcriptional activator
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpi03000
]
Cpin_4307
Transcription factors [BR:
cpi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cpin_4307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
HTH_8
MCM
AAA
Mg_chelatase
cREC_REC
AAA_16
AAA_2
RWP-RK
AAA_3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACU61755
UniProt:
A0A979G6H3
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All DBs
Position
complement(5365131..5367038)
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AA seq
635 aa
AA seq
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MKEHILIVEDQFVEADYLRLLLEKAGYIITGIARSVPQAQKMIKEQRPDFVLLDIFLKGK
QTGIDLAKMLAADNIPFVYLSANSNEEILTCAKQTQPYGFLVKPFREKDLLVALEIARYR
HAHSTEARYHKEMELRKVLRAIPDDTGAWSQKMLTIATALQSYMPFDFITMQFDHLQMLG
FLRIGFNEYQIIGMEELAVISGKKIDELMTLQLQHPVTETAVIYDDTAFQHICKQPCLKK
LFAATFRLKTHLEMPMQMIDRKPFSLGLYSRRADVYATEHIELLERMQFALMQAIEKISV
ADKSQGDIYAADNVNILEGFEGIVGKSHLLLSVFDHISQVAPSDTSVLILGESGTGKEKI
ANSIHELSPRKGQPFIKLNCAALPAGLIESDLFGHEKGSFTGALERKIGKFERADGGTIF
LDEVGEMPLELQVKLLRVLQEKEIERVGGTDTLRVDVRVIAATNKNLEKEVAEGRFRLDL
YYRLNVFPIILPPLRDRREDIPLLAYHFMNHYSHKAGKKICGISESVLKKMMAYNWPGNV
RELEHLVERSVLLTKGTVIENILLPTIEVKQGTAGQEEKTMKTIVENERDYIISVLKKSN
GRIWGPGAAAEVLNINPSTLKSKMKKLGIKKEYIE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacacattctcatcgtagaggaccaatttgtagaagctgattatttgcgcctg
ttactggaaaaagccggttatatcattaccggtattgcgcgctcagtaccccaggcgcag
aaaatgatcaaagaacaaaggcccgattttgttcttttagatatcttcctcaaaggaaag
caaaccggcattgatctggcgaagatgctggctgcggataatattccgtttgtatatctg
tccgccaactccaacgaggaaatattgacatgcgcaaaacaaacgcagccatatggcttc
ctggtaaaacctttcagggagaaagacctgctggtagcacttgaaatagcccgttaccgt
cacgcgcatagtaccgaagcccgttatcataaggaaatggagctacgtaaagtattaagg
gctattcccgatgataccggcgcctggtcgcaaaagatgctgactatagcgacagcactg
caatcttatatgccatttgatttcattacgatgcaatttgaccatctgcaaatgcttggc
tttttgaggatcggatttaatgaatatcagatcattggcatggaagagctggcggtcatc
agcggaaagaaaatagatgaactgatgacattacaattacagcatccggtgacggaaaca
gctgtgatttacgatgatacggcttttcagcatatctgtaaacagccttgtttaaaaaag
ttattcgcggctaccttccggttaaaaacccatctggaaatgccgatgcagatgatcgac
cgaaagccatttagtctggggctatatagcagaagggccgatgtgtatgctacggagcat
attgagctccttgaaaggatgcagtttgcattgatgcaggcgattgagaaaatcagtgta
gcagataagtcacaaggtgatatctatgctgcagataacgtaaatatcctggaaggcttt
gaagggattgtgggtaaaagtcacctgttgttgtcagtctttgatcatatttcgcaggtg
gcgccttctgatacgtctgttctgatactgggtgagagcgggacaggcaaggaaaagatc
gccaatagcatacatgaattgtcacctcgtaaaggacaaccatttatcaagctgaattgt
gcggcattaccagcaggactcatcgaatcagatctctttgggcatgaaaaaggatctttt
acaggtgcgctcgaaaggaagatcggtaaatttgaaagagctgacggaggaacgatattc
ctggacgaagtcggtgaaatgcccttggaattgcaggtgaaattattgcgggttttgcag
gagaaagaaattgaaagggtaggaggaactgatacattaagggtagatgtacgggtcatc
gcagctacgaataaaaatctcgaaaaggaagtcgctgaaggccgttttcggcttgacctc
tattaccgattgaatgtttttccgatcatattacctcctttgcgtgacagacgggaagat
atcccattgttggcatatcactttatgaatcattacagtcataaggcaggcaaaaagatc
tgtggtatatcagagagcgtgttaaagaagatgatggcttataactggccgggtaatgtc
cgggaacttgagcatttggttgaaagaagtgtgttgctaacgaaggggactgttattgaa
aatatattgttgccgacaatagaagtgaagcaaggcacggcagggcaagaggaaaagacg
atgaaaacaatcgtagaaaatgaaagggattatatcatttctgtactgaagaaaagtaac
ggccggatatggggaccgggtgcggcagcagaagtcttgaatataaacccttctacgtta
aaatccaagatgaagaagttgggcataaagaaggaatatattgagtaa
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