Chitinophaga pinensis: Cpin_4546
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Entry
Cpin_4546 CDS
T00959
Name
(GenBank) transcriptional regulator, LuxR family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_4546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_4546
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_4546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
Sigma70_ECF
HTH_AsnC-type
HTH_23
SusR_C
DUF2192
HTH_11
Lin1244_N
HTH_7
Xre-like-HTH
HTH_5
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ACU61988
UniProt:
A0A979G7B8
LinkDB
All DBs
Position
5678746..5679342
Genome browser
AA seq
198 aa
AA seq
DB search
MRGNSNNTYSDLELITMLKRGDMDAFDILYTRHWSAMYQSAYYLLRDQSACMDIVQDIFA
WLWEKRDQLDIQTVPSYLRTAVKFKVANYIRSGNIREDFYEELSKLTIATLPGPQELLEL
TDLKTIIQQAVTGLPEKCREIFLLSRDGQLSNQQIAEVLNISVKTVEAQKTIALKRIRAA
VEPHLLALLIIPFVTCYH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgagaggtaacagcaataatacttatagtgacctggagctgataacgatgctcaagaga
ggtgatatggatgcatttgacatactgtatacccgacactggtcagctatgtatcagtca
gcttattaccttttgcgcgatcagagtgcatgtatggacatagtacaggacattttcgcc
tggttatgggagaagcgtgatcaactggatatacagacggtcccatcatatctgcgcacg
gcagtgaagtttaaggtggccaattatatcagatcagggaacatcagggaagatttttac
gaggaattatccaaactcacaatagccacgcttcctggtcctcaggaattgctggaactg
actgatctcaaaacgatcatccagcaggcggtaaccggtttacctgaaaagtgcagggag
atattcctgctcagccgggacggccagttaagtaatcaacagatagccgaggtactcaat
atctccgttaaaacggtcgaagcacagaaaaccatcgcgttaaagcgcatccgcgcagca
gtagagccacatctgctggccttgctgatcatcccctttgtgacctgttaccattaa
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