Chitinophaga pinensis: Cpin_4878
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Entry
Cpin_4878 CDS
T00959
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpi01002
]
Cpin_4878
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpi01011
]
Cpin_4878
Peptidases and inhibitors [BR:
cpi01002
]
Cysteine peptidases
Family C82
Cpin_4878
Peptidoglycan biosynthesis and degradation proteins [BR:
cpi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Cpin_4878
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
DUF3584
Motif
Other DBs
NCBI-ProteinID:
ACU62312
UniProt:
A0A979G7Z9
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Position
6100686..6102122
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AA seq
478 aa
AA seq
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MRKIAYLIILMMMYANAGRAAEKMYWLPADCSQNRQQLFSYFKQAALLGLEQRDYAFALV
QQLQSGYMPTDSLMTDRALTQAAIAFFTDVAYGPAITRIGYDGLKYVPDCLDIPTLLYSA
LANNNFNKLLEKVEPSAPQYNALKSMIAFYNDRLQRQDYHPVKITSETADSSNHPLIDKL
YQLGFLDAPDYTAHEDTLRIKIRAAEYMFEFLEDGALRQGVIEELNVSLEKRLSELKHAI
NTFRWLNCLRKYQYVVVVDIPAAELFVYLGDSTMLNSRVIVGKAKTPSSPLASRIDEVIL
FPYWTVPHNIAVKELLPGIKGAPSIYLEAGNYQVLDKSGRILDPQSINWNTLNKHNFPYT
LRQMFGCDNSLGIIKLNFFNPYSTYLHDTPARSYFMFNSRYFSHGCIRVEDAIPLAKLLV
PAEAPRIDSLSRMKTPPAGSPITIPMKPGIPVIILYEVAWPDANGKVRFFEDVYEKFK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatagcctatctgatcatcttaatgatgatgtacgccaacgccggccgggcc
gcagaaaagatgtactggttaccggctgattgctcgcaaaatcgtcagcaactattcagt
tattttaagcaggcggctttattagggttggaacaacgggactatgcttttgccctggta
cagcaactgcaatctggttatatgccgacagactctctcatgacagacagggcgctcact
caggcggcaattgcattttttacggatgtagcctatggccctgcaatcacacgcattgga
tatgatggtctgaaatacgtgccggattgccttgatatccccactcttctttatagcgcc
cttgctaataacaactttaacaaattgctggaaaaagtagaaccttcggcaccacaatac
aatgccttaaaaagtatgattgcattttataatgacagattacagcggcaggattatcac
cctgtaaaaatcacctccgaaacagccgatagcagcaatcatccattgatagataaatta
taccagcttggcttcctcgatgcgcctgactatactgcgcatgaagacacccttcgcata
aagataagagcggctgaatatatgttcgaattcctggaagatggagcattgagacaaggt
gtaatcgaggagttaaatgtttcactggagaaaaggctgtccgaactcaaacatgccata
aacaccttccgctggttaaactgtttgcggaaataccagtatgtagtggtcgtagatatt
cccgccgcagagctgtttgtatatcttggcgacagtaccatgcttaattcccgggtaatc
gtaggtaaagcaaaaacgccatcctctcccctggcgagcaggatagatgaagtcatcctg
tttccttactggacagtgccgcacaacatcgctgttaaggaattgcttccgggtattaaa
ggcgctccttccatataccttgaagcgggcaactaccaggtactggataaatcaggcagg
atactggatccgcaatctattaactggaatacgctgaataaacataatttcccttatacg
ctgagacaaatgtttggttgcgataattcgctgggtattattaaactgaatttctttaac
ccatacagcacttatctccatgatacccctgcaagaagttactttatgttcaacagcagg
tatttcagtcacggttgtatcagagtagaagacgccattcccttggcgaagctactcgta
ccagctgaagctccgcgtattgatagtttatcccggatgaaaacaccgcctgcgggtagt
ccgataactatccccatgaaacccggtatacctgtcatcatcctgtatgaagtggcctgg
cctgacgcaaacggcaaagtgcgtttctttgaagatgtatatgaaaagtttaaataa
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