Chitinophaga pinensis: Cpin_4885
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Entry
Cpin_4885 CDS
T00959
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_4885
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpin_4885
Archaeal homologous recombinant proteins
Cpin_4885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACU62319
UniProt:
A0A979G7F4
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Position
6110780..6112024
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AA seq
414 aa
AA seq
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MKILHTADWHIGQTFYQYDRTYEHQQFLHWLVDTIKAHDVELLIISGDVFDIANPSAVAI
KLFYAFLNSAVKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIVGLIERKEDGSINY
EKMLIPVRDRNGETVLWCMAIPFLRMGDYPAVAESETLYADGVSALYKEAYEHALTKKQG
GQGIIAMAHLHTLDAELSDHDKSERVIMGGIEFVPAKAFHEELLYVALGHIHKAQKIGGK
EHIRYSGSPLPMSFSEMNYKHQVVSFDISNGVMSGLEMLEIPVTTELLRVPAKPQPIEAV
LEALLQLPEATETIHTAPYLEVRVLLEGPEPALRHKIETALAGKHVRLAKIDVRYPSSAA
EGTGERIASAAQLQELSPLDIFKKIYQEDYERETPEELVALFQQVLQEINTKEE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcatactgcggactggcatatcggacaaaccttttatcagtatgacagg
acgtatgagcatcagcagtttttacactggctggtggataccattaaagcacacgatgta
gaactgctgatcatcagcggagatgtgtttgatatcgccaacccttccgctgttgccatc
aaattgttttacgcatttctcaatagtgccgtaaaggcacaaccaggattacagatcatc
gtgacggctggtaatcatgactctgccgcccgactggaagcgccgaagcctttactggaa
tcttcggacatccatatcgtcggactgatagaacggaaggaagatggcagtatcaattat
gagaaaatgctgatccctgtgagagacaggaatggcgaaacagtgctgtggtgtatggcg
atcccgtttctgcgtatgggcgattatccggcggtagccgaaagcgaaaccctgtatgcg
gatggtgtaagcgcactgtataaagaagcctatgaacatgcactgacaaaaaaacaagga
ggacagggcatcatcgcaatggcacacctgcatacattggatgctgagctgtctgatcac
gataaatctgagagagtgatcatgggaggtattgaattcgttcctgcgaaagcgtttcac
gaagagctgctgtatgtagccttgggacatattcataaagcccagaaaataggtggaaaa
gaacatatccgctacagcggtagtccgctgccaatgtcattctctgaaatgaactacaaa
caccaggtggtgagctttgatatcagtaatggcgtcatgagcggactggaaatgctggaa
ataccggtaacgactgaactactgcgggtacctgccaaaccgcagcccatcgaagcggtg
ctggaagccttattacaattgccggaagcgacggaaacaatacataccgctccttacctg
gaagtacgtgtactgctggaaggacctgaacctgccctgcggcacaagatagaaacagcc
cttgccggcaaacatgtgcgactggcaaaaatagacgtccgctacccctcctccgcagcc
gaaggaacaggagagaggatcgccagcgctgcacaattgcaggaattaagtccgctggat
atctttaaaaagatttaccaggaagactatgagcgcgaaacgccggaggaactggtggcc
ctgtttcagcaggtattgcaggagattaacacaaaagaagagtaa
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