Chitinophaga pinensis: Cpin_4886
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Entry
Cpin_4886 CDS
T00959
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_4886
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpin_4886
Archaeal homologous recombinant proteins
Cpin_4886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
RsgA_GTPase
AAA_22
MutS_V
cobW
AAA_16
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ACU62320
UniProt:
A0A979G7Q8
LinkDB
All DBs
Position
6112031..6115765
Genome browser
AA seq
1244 aa
AA seq
DB search
MKILAIRFKNLASLEDTNEIDFTKEPLSKAGIFAITGPTGAGKSTLLDALCLALYARTPR
YLQAKETGIEIQDQGGNKISQGDVRGILRDGTAEGFAEVEFAGVDGNNYKARWAVKRARN
KIDGNLQADTVELFNLTTNGVFPGKKTETLREIERVVGLNFEQFTRSVLLAQGDFTAFLK
ADKDAKASLLEKLTGTNIYSEISVGIYNKFKEADTELRNLKQQVAGIERLTEEERMALHA
QQEELGAKISSQQITIAELGAAISWYQLLDTLEKNREQATDQYQQATLAMENAGERIRNF
TLVEHVQAARGPVEARRSHEQQLAEKEKALQEIDARIMRTTEAQQQAATALETAHAAVLH
AQQEAAKHQPDITRARELDTLTGEKDRQLQQAVTEAANAQKQQDAHLKAFEEKEKEIHTL
AQAISKLEDWQRDHLGRKDIAENIIEISAQLGHTAKLLPVQQEALKEQQENASFIRKAQE
QITDLQEKADKEQAESARLQTELDEANKLLQAVPLETLKEKDTRLDQQIREGEAAKIHWE
RLFGSLQEKEKTARQLENCAQELKEKTAALQEKQAELTIAQAKKEQSDKLLHQARLQVAE
NVESLRAQLVQDEPCPVCGSKAHPFVTDNPLAHAMLKTLEEEYNAALRYYNTLSGDISSL
EQFCKKLLLDSETFNKSLQERVTQIASLEEKWAGFSLAAASKAAPDENKAQWLEEQVQQL
QTAQKEIAVQLKAYDAQRNAVETLKSQLDIKQQALSANKEQLKDRQREKTSKEEAQERIA
RQLEHITESLRTMTEQLAPHFSNPDWVDNWKKDPQGFNAKIVAFAQQWKQQAEAIIANNQ
QLREHQSALQEMGRQGPAIAAALSEKINALQQQQAAFNALQQERQALLNGATVISFEQRL
KQVIEQAVLTQQTATEVFNTGKEDLRAYTASKDTTTADITNIRSNIDKERAAIGAWLKNY
TATYGSTLTEETLTQLLSHTAAWIETERKAITALRDAVNTTQATLIERSLQLSNHQEKRV
SDQSLEALTASSNEAKQVLEDLGREKNNLAYRLRQDEENKLKIGDLQYTIDAKTAVHENW
SKLNELIGSADGKKFRQIAQEYTLDMLLDHANMHLSMLTRRYKLLRIPGNLALQVLDKDM
GDELRTVFSLSGGESFLVSLALALGLASLSSSKMKVESLFIDEGFGALDPDTLNIAMDAL
ERLHNQGRKVGVISHVQEMTERIPTQIKVIRMANGKSKVEVTGA
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattagccattcgtttcaagaacctggcatcactggaagatacgaacgagata
gatttcacaaaagaaccattgagcaaagcagggatctttgctattaccggtccgacaggc
gctggtaagtccaccttactggatgccctttgcctggccttatatgcaagaacgccccgt
tatctgcaggctaaggaaaccggtatagaaatacaggatcagggaggcaataaaatcagc
cagggtgacgtcagaggtattttacgtgatggtacagcagaaggttttgcagaggtagaa
tttgctggagttgacggcaataactataaagcaagatgggccgttaaacgtgcccgcaat
aagatcgatggtaacctgcaggcggatacggtggaattatttaatctgacgaccaacggt
gttttcccgggcaagaaaacagaaaccctgcgggaaatagaaagggtggtcggactgaac
ttcgaacagtttacccgttcggtattactggcacagggcgacttcaccgcctttctgaaa
gcagataaagatgccaaggcttccctcctggaaaagctgacggggacaaatatctattct
gaaatatccgtaggcatctataataaattcaaagaggcggatacggaactcaggaatctg
aaacaacaggttgcaggtattgagcgactgacagaagaggaaagaatggccctgcacgca
caacaggaagaactgggtgctaagatcagcagccagcagatcactatcgcagaactgggc
gctgcgatcagctggtatcagttgctggataccctggaaaagaacagggaacaggccacc
gatcaataccagcaggctaccctggccatggaaaatgcgggagaaaggatccgcaacttt
acactggtagaacatgtacaggcagcgagaggtccggtggaagccagaaggtcgcatgag
cagcaactggccgagaaagagaaggctttacaggagatcgatgcccgtattatgcgaact
acggaagcacaacaacaggcagcgacagcactggaaactgcgcatgcagcggtattacat
gcacagcaggaagccgcgaaacaccagcctgatataacacgtgccagggaattagatacg
ctgacaggcgaaaaggaccggcagctgcaacaggcagtaacggaagcagccaacgcacaa
aaacaacaggatgcccatctgaaagcatttgaggaaaaggaaaaagagatccatacactt
gcacaggccatcagcaaactggaggactggcaaagggatcatctcggcagaaaagatatt
gcagagaatattatagaaatcagcgcacaactggggcatactgccaaactattgcccgta
caacaggaggcgctgaaagagcagcaggagaatgccagttttatccggaaagcacaggag
cagataacagacttacaggaaaaagcagacaaagaacaggcagagagcgcccgtttacag
acagaactggacgaagccaataagctgctacaagctgttcccctggaaaccctgaaagaa
aaagatacccgtcttgatcagcagataagagaaggcgaagccgcgaaaatccattgggaa
agactgtttggtagtctgcaggagaaagagaaaaccgcacgtcagctggaaaactgtgca
caggaactgaaagaaaagacagccgcacttcaggagaaacaggccgaactgaccatcgcc
caggcaaaaaaggagcagtcagataaactgctgcatcaggcacggttacaggtagcagaa
aatgtagaatccctgcgcgcacaactggtgcaggatgaaccttgtccggtatgtggcagt
aaagcgcatcctttcgttacggacaatccgctggcacacgccatgctgaaaacactggaa
gaagaatacaatgctgctttaaggtactacaatacgttatcaggcgatatcagcagcctg
gagcaattctgcaaaaaactattacttgacagcgaaacattcaacaaatccttacaggaa
cgagtgacgcagatagcctccctggaagagaaatgggcggggtttagtctggcagctgcc
agtaaagccgccccggatgaaaacaaggcgcaatggctggaagaacaggtgcagcaatta
cagaccgctcaaaaggaaatagcggtacagctgaaggcttatgacgcgcaaaggaatgcg
gttgaaaccctgaaaagccagctggatataaaacaacaggcactgtctgcaaataaagag
cagctgaaagacaggcaacgtgaaaagaccagtaaggaagaagcgcaggaacgtattgcc
agacaactggagcatataacggaaagtctccggaccatgaccgaacaactggccccccat
ttcagcaatccagactgggtagataactggaaaaaagatccacagggattcaatgctaaa
atagtggcctttgcccaacaatggaaacaacaggcagaagctattatcgcgaataatcag
cagttacgtgagcaccagtcagccttacaggaaatgggcagacagggaccggccatcgcg
gctgcattaagtgaaaagatcaatgcgctgcaacagcagcaagcggcgtttaatgccctg
caacaggaacggcaggcattactgaacggagcgactgttatcagctttgaacaaaggttg
aaacaggtcatcgaacaggcagttctcacacagcagacagcgacagaggtatttaataca
ggaaaagaagatctgcgggcctacaccgccagtaaagacaccacaacggcagatattacc
aacattcgcagtaatatcgacaaagaacgggctgccatcggagcatggttaaaaaactat
actgcgacctatggcagcacgttgacggaagaaacactcacgcaactcctctcccacacg
gccgcctggatagaaacagaaagaaaggcgatcacggctctgcgggatgcggttaatacc
acccaggctaccttgatcgaaagatccttacagttaagtaatcaccaggaaaagcgcgta
agcgatcaatccctggaagcattaactgcttcttccaatgaagcgaaacaggtactggaa
gacctgggcagggagaagaacaacctggcctacaggttacggcaggatgaagaaaataaa
ctgaagatcggcgacctgcaatataccatcgatgcgaaaacagccgtacatgaaaactgg
agtaaactaaatgaactgatcggctctgcggatggtaaaaagttccggcagatcgcacag
gaatacaccctggatatgctgctggatcatgccaatatgcacctgtccatgctgacccgc
cgttataagctattgagaatacccggtaacctggctttacaggtgctggataaagacatg
ggggatgaactaaggacggttttctctctttccggaggagaatctttccttgtctcactg
gcactggcattaggattagcatccctatcgtccagcaagatgaaagtagaatccctgttt
attgacgaagggtttggcgcactggatcctgacacgctgaatattgcgatggatgcactg
gaacgtttacataatcagggccgtaaggtgggggtgatttctcacgtacaggaaatgacg
gaacgtattcccacgcagataaaagtgatcaggatggccaatggaaaaagcaaggtggaa
gtgactggggcttaa
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integrated database retrieval system
