Chitinophaga pinensis: Cpin_5133
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Entry
Cpin_5133 CDS
T00959
Name
(GenBank) transcriptional regulator, AraC family
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpi03000
]
Cpin_5133
Transcription factors [BR:
cpi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Cpin_5133
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
MarR
Fe_dep_repress
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACU62565
UniProt:
A0A979G856
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Position
complement(6405591..6406514)
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AA seq
307 aa
AA seq
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MKQGKAVTVNTRNLSEIHRDYGLPVPAHPLISLIEWPKHQIPKNNFSGAIVSGFYRITFN
TGLSGKSKYGQGYYDYSEGGMTFVAPTQVISPCVYDVADDWSMYTLLIHPDFLWNYPIAK
TIKQYGFFSYNTNEALHLSDKEKSTIIAIFENIQDELNSRIDDVTQNVIIAQIELLLSYA
DRFYKRQFITRKVVNNDLLQKMDDMLDDYLNSDKTLSEGIPTVHFLAEKLNVSPSYLSDM
VRSVNGQSALGIIHQKIIEKAKEKLSGTNMSVSEVAYELGFGHPSSFTKLFKTKTNLSPL
EFRKSFN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggggaaagcagttacagtaaatacgcgaaatttgtcagagatacaccgggat
tacggattgcctgttcccgcacatccattgatcagtttgattgaatggcccaaacaccag
ataccgaaaaacaatttctccggagctattgtgtctggattttaccgtattacctttaat
acaggtttgagtggtaaatctaagtacggccagggctattatgattattcagaaggaggg
atgaccttcgtagcaccgactcaggtgatcagtccctgtgtttatgatgttgccgatgac
tggtcaatgtacacgctattgatccatccggactttctttggaattatccaattgctaaa
accatcaaacaatatggctttttctcttataacaccaatgaggcgctccatctttcagat
aaagaaaaaagcaccatcattgcgatatttgaaaatattcaggatgaactgaatagccgg
atcgatgacgtcacccagaatgttattatcgcccagatcgagttactgctgagctatgct
gaccggttctataaacgacaattcataacccggaaggtcgttaacaacgatttattgcaa
aagatggatgatatgctggatgattacctgaacagcgacaagaccctcagcgaaggtatt
cctaccgtgcatttcctggcggagaagctgaatgtatcgccgagttatctgagtgatatg
gtgcggtctgttaatggacaaagtgccttaggtatcatccatcagaaaatcatcgaaaag
gctaaggaaaaactttcgggtaccaatatgtctgttagtgaggttgcatatgaattaggc
ttcgggcatccatcatcgtttacaaaattattcaagacaaagaccaatctgtcaccattg
gagttccgaaagtcgttcaattga
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