Chitinophaga pinensis: Cpin_5498
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Entry
Cpin_5498 CDS
T00959
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpi
Chitinophaga pinensis
Pathway
cpi03030
DNA replication
cpi03430
Mismatch repair
cpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpin_5498
03430 Mismatch repair
Cpin_5498
03440 Homologous recombination
Cpin_5498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpi03032
]
Cpin_5498
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_5498
Enzymes [BR:
cpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpin_5498
DNA replication proteins [BR:
cpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cpin_5498
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cpin_5498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACU62927
UniProt:
A0A979G937
LinkDB
All DBs
Position
complement(7012193..7013563)
Genome browser
AA seq
456 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAIYIYDGRNIVQQYETLINPGVPIPRYIQSLTGITDEM
VANAPAFDEVAGDIFALLHDKIFVAHNVNFDYSFIQYHLAQAGYQLRTKKLCTVRLGRKI
IPGLPSYSLGNLCKSLEISVTQRHRAAGDAAATVKLFGLLLQQDTGKAIAHALSTHSKEQ
FLPPNLPPEQVTALPGTPGVYYFHDQKGKVVYVGKAKNIRKRVNSHFTGNSAGRKRQEFL
RNIYSISHEVTGTELMAHILESVEIKRLWPVYNYSQKYIEFKYGFYCFEDQEGYLRLVIE
KRRKYSAPLHSFPLLVQGHQMLRGLIREFDLCPRLCFLQKGQGACSPIPDHTCRGACEKK
ETSETYNLRVKAAIIHMQQQQPTFAIIGMGRDAQEQSCILMEKGRFYGMGYIPRDTAITE
GPQCKEWLTQYPENEYILNLIHQHAGAHDQELLKFS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatagttgatatagaaactacaggtggccatgccagtgcaaacggcattacg
gaaatagccatttatatttatgacggacggaatattgtacagcaatacgaaacgctgatt
aatccgggtgtacccattccccgatatattcaatcccttaccggtattacggacgagatg
gtagcaaacgcaccggcctttgatgaagtagccggcgatatcttcgccctgttacatgat
aagatcttcgtagcacacaacgttaatttcgattattcctttattcaatatcatcttgcc
caggctggatatcagttacgcactaaaaaactgtgtacggtaaggcttggccgtaagatc
attccgggactgccttcttacagtctgggtaatctgtgtaaatcactggaaatctccgtt
acacagcgtcaccgcgctgcgggagatgcagcagcaacggtaaaactgtttggcctgtta
ttacagcaggatactggtaaggccattgcccatgctttgtccacccactccaaagaacag
ttcctgccaccgaacctgccacctgaacaggtaacggcattaccgggtactccgggtgtc
tattatttccatgatcagaaaggaaaagtggtgtatgtagggaaggcgaagaatatccgg
aaacgtgtcaatagtcattttacgggtaacagtgccggcaggaaaagacaggagtttctt
cgtaatatatacagtatttcgcacgaagtgacgggcacagagctgatggcgcatatactg
gaaagtgtggagatcaaacgactgtggccggtttataactattcgcagaaatatatagaa
ttcaaatacggcttttattgttttgaagaccaggaaggctatctgcgtctggtcatcgag
aaacgccgtaaatattccgccccgttgcactcttttccgttactggtgcaggggcatcag
atgttacggggcctgatcagggaatttgatctttgtccccgcctgtgcttcttacaaaaa
gggcagggcgcctgttcaccgatccccgatcatacctgccggggcgcctgtgagaaaaaa
gaaacgtccgaaacctacaatctccgggtaaaagctgccattatccatatgcagcaacag
cagccgacattcgccattattggtatgggacgcgatgcgcaggagcagagttgcatcctg
atggagaaaggacgtttctacggaatggggtatattccccgtgataccgctatcacagaa
gggccgcagtgcaaggaatggttgacacagtatcctgaaaatgaatatattctgaatctc
attcaccagcatgccggcgcgcatgatcaggaactgctgaagttttcttag
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