Chitinophaga pinensis: Cpin_5916
Help
Entry
Cpin_5916 CDS
T00959
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpi03016
]
Cpin_5916
Enzymes [BR:
cpi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Cpin_5916
Transfer RNA biogenesis [BR:
cpi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Cpin_5916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACU63334
UniProt:
A0A979GYN2
LinkDB
All DBs
Position
7508476..7509897
Genome browser
AA seq
473 aa
AA seq
DB search
MLEQVTKVHDESRQGEAYAPVAGESQTYTKKFYIESYGCQMNFNDSEIVASILKEEGFGP
TRNVEEASLVLLNTCSIREKAETTVRKRLTEFRKIKQRNPELLVGVLGCMAERLKAKLLE
EEKLVDMVVGPDAYRTLPALIEEAETGQKAVNVLLSREETYGDISPVRLDSNGVTAFVSI
MRGCNNMCSFCVVPFTRGRERSRDKASILQEATDMFNRGYREVTLLGQNVDSYYWVSPDN
DNDITTFANLLEAVALISPLLRVRFSTSHPKDITDDVLYTMAKYENICKYIHLPMQSGST
RILQLMNRTYTREWYIKKVDRIREILPGCALSTDVITGFCTETEEDHQDTMTLMDYGQYD
LAYMFFYSERPGTLAARRYQDDVPEEVKKRRLSEIVDLHRAQSLKSMQQDVGKTFKVLIE
GVSKRSEDQLFGRTDHNKVVVFPKEDFRKGEYIWVKVEDCTAGTLLGTSTGRA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacaggttacaaaagtgcatgacgaaagtcgccagggcgaggcttacgcgcct
gtggccggagaatcacagacttatacaaaaaaattctatatagagagctatggttgccag
atgaacttcaacgatagtgagatcgtggcatccattctgaaagaagaaggcttcggtcct
acccgtaacgtggaggaagcgagcctggtattattaaatacctgttcgatccgcgaaaaa
gcggagacgactgtacgcaaacgcttaacagaattccgtaaaataaaacagcgtaacccg
gaactcctggtgggagtattgggctgtatggctgaacgactgaaggccaaactgctggaa
gaggaaaaactggtagacatggtagtaggtcctgatgcctacagaacattaccggccctc
attgaagaagcagaaaccggtcagaaagccgtgaacgtactgctcagccgcgaggagact
tacggcgatatcagtccggtaagactggacagtaatggcgttactgccttcgtatccatt
atgcgtggctgtaacaacatgtgttccttctgtgtagtaccgtttacccgcggccgtgaa
cgcagcagggacaaagcgtctattctccaggaagcaaccgacatgttcaacagaggctac
cgcgaggtaacactgttggggcagaacgtggattcctactactgggtaagcccggacaat
gacaatgatatcaccaccttcgccaatctgctggaagcagttgccctgatcagtccactg
ctcagagtacgcttcagtacctctcatccgaaagacattaccgatgatgtgctgtacacc
atggcgaaatacgagaacatctgcaaatacattcacctgccgatgcagagtggaagtacc
cgcatactgcaactgatgaaccgtacttacaccagggaatggtacatcaaaaaggttgac
cgcatccgcgaaatactgccaggttgtgcattgtccaccgacgtgatcaccggcttctgt
acagaaacagaagaagatcaccaggataccatgacattgatggattatggccaatacgac
ctcgcctatatgttcttctattccgaacgtcccggtacactggctgcacgccgttaccag
gatgacgtgccggaagaagtgaagaaacggaggctgtcagaaatagtggacctgcatcgc
gcacaatcactgaaaagtatgcagcaggatgttggtaaaacgtttaaagtgctgatcgaa
ggcgtttcaaaacgttccgaagatcaactttttggcagaacagatcataataaggtagtg
gtattcccgaaagaggatttccgtaaaggggaatatatctgggtgaaggtagaggattgt
actgccggcactttactgggaacttcgacagggcgagcttaa
DBGET
integrated database retrieval system
