Chitinophaga pinensis: Cpin_6237
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Entry
Cpin_6237 CDS
T00959
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cpin_6237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_6237
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_6237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Flu_PB2_3rd
Mor
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
ACU63643
UniProt:
A0A979GA76
LinkDB
All DBs
Position
complement(7858025..7858882)
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AA seq
285 aa
AA seq
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MRQLKIATQITNRDSQAVEKYLQEISKIPLLTPEEETVLAQRIKMGDQKALERLTTGNLR
FVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAE
QGRLVRLPQNKIGTYNKANKAYMAFEQENEREPSTEELAEILEMSESEINNIFQSNTRHM
SLDAPVHEAEDVAMGDLLEGGDITDDDVMRDSLREEIRRVLKSLSPREAEIVNAYFGLDG
ENGATIEQIGQKYDLTKERIRQIKERAIKRLQKARYSGALKSYLG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacttaaaattgccacccagatcacaaaccgtgattcgcaggcggtagaaaaa
tacctgcaggagatttcaaagatccctttgttaacacctgaggaagagaccgttttggcg
cagcgcattaagatgggtgaccagaaggctcttgaacgtttaactacaggaaaccttcgt
ttcgtagtatcagtagcaaagcaatatcaacaccagggcttaagcctcagcgacctcatt
aacgagggcaatttagggttgatcaaggctgcgcagagattcgatgaaacgaaagggttc
aaattcatttcttatgctgtttggtggattcgtcaatccatactacaggctttagcagaa
cagggccgtctggttcgtctgccgcagaataaaatcggcacttacaataaagctaacaaa
gcctacatggcatttgaacaggagaatgaaagagaaccttcaacagaagagttagcagag
atcctggaaatgtctgaatcagagatcaacaatatcttccaaagcaatacccgtcacatg
tcattggatgctccggttcacgaagcagaagatgtggcaatgggggacctgctggaaggt
ggcgatatcactgatgatgatgtgatgcgtgattcactgcgtgaagagatccgtcgtgtg
ctgaaatcactcagccctcgtgaagcggagatcgtaaacgcatactttggtctggatgga
gagaatggagcaacgatcgaacaaatcggtcagaaatacgacctgacaaaggaaagaatt
cgtcaaatcaaggaacgcgccatcaaaaggctgcaaaaagcccgctacagcggagcactg
aaatcttacctgggttaa
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