Chitinophaga pinensis: Cpin_6450
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Entry
Cpin_6450 CDS
T00959
Name
(GenBank) transcriptional regulator, LuxR family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_6450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_6450
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_6450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
HTH_24
DUF722
DXP_synthase_N
HTH_23
Xre-like-HTH
DUF134
TraG_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ACU63854
UniProt:
A0A979GAN0
LinkDB
All DBs
Position
complement(8106004..8106684)
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AA seq
226 aa
AA seq
DB search
MPFKEQHILISVNTFLKTKTALPRGDRFVLTHFINNDQRLAARLRNSDHTAFEELYATYH
QLLYGTAYKYLKSDTAAEDAVHEAFVKVWVHREELDPVQGVRNFLFKCLKFHVLNLIRDH
KRSLSKQYELLYNAAADHRDTESTVILNDYRKVVERAVESLSAQKKKIFRLRSYEGLSNE
EVAEKLGLSINTVKFQYAQASKALRHVLKIMMSTLFGLVILLVIFF
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccttttaaagaacagcatatcctaatttcggttaacacgtttttgaaaaccaaaaca
gcactaccaagaggggacagatttgtgttaacgcattttattaataacgaccaacggctg
gcagcacgcctgcgcaatagtgatcataccgcttttgaggaattatacgctacctatcat
cagttactgtatggtactgcctataaatacctgaaaagcgatacggctgctgaagatgct
gtgcatgaagcttttgtaaaagtctgggtacaccgggaagaacttgatccggtacagggc
gttcgtaattttctctttaaatgcctgaaatttcatgtactgaaccttatccgggatcat
aaacgtagcctttccaaacaatacgaactattatacaatgctgctgctgatcatcgtgac
acggaatccaccgttatattgaatgattacagaaaggtggtagaacgcgccgttgaaagt
ttgtctgcccagaagaaaaagatcttccgcctccgttcctatgaaggactgagtaatgaa
gaagtagcggaaaaactcggtttgtccatcaataccgtcaaatttcaatatgcccaggcc
agcaaagccctgcgccacgtcctcaagatcatgatgagtaccctcttcggcctggttatt
ctccttgttatctttttttaa
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