Chitinophaga pinensis: Cpin_6731
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Entry
Cpin_6731 CDS
T00959
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_6731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_6731
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_6731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
PAW
HTH_24
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACU64132
UniProt:
A0A979GU03
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All DBs
Position
8431269..8431865
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AA seq
198 aa
AA seq
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MFLLLPQHSNDRKLSYSSLPEEQELLRQIARGDESAYTLVFNHYSKQVFNVAMLYLKDTT
PAREVVQEVFLKIWLKRETMSDVEDLTGYLFILTRNHIYDNFKKQANLLKALDSFIQLQP
AAIADTDHRLQQHQYDHLLNKAVSSLPPERKKVYIARKEGLSNEEISHKMNISIHTVKKQ
MQLAVQTVRSFVKQQLHI
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgttcctacttttaccgcagcattcaaacgataggaaattgtcatattcatccttacca
gaggagcaggaattattacggcagattgccaggggtgacgagtctgcatatacacttgta
tttaatcattatagtaaacaagtgttcaatgtagccatgctttatctgaaagacaccaca
ccggcccgggaggtcgtacaggaggtttttctgaaaatatggctgaaaagggaaactatg
tccgatgtggaagacctcaccggttatctcttcattcttacccgtaatcatatatatgac
aatttcaaaaaacaggctaatctcctgaaagcactggacagcttcatccagttacaacct
gcagccattgcagataccgaccaccgcctccagcaacaccagtacgatcaccttttgaac
aaagcggtatccagccttccccctgaacgtaaaaaggtatatatcgcccgtaaagaggga
ctgagtaatgaagagatctcccataaaatgaacatttccattcatactgtcaagaaacag
atgcaactagccgtacaaacagtcagaagttttgtgaaacagcagctccatatctga
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