Chitinophaga pinensis: Cpin_7045
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Entry
Cpin_7045 CDS
T00959
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_7045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_7045
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_7045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_40
HTH_10
NUMOD1
HTH_5
HTH_Tnp_ISL3
HTH_38
Sigma70_ECF
HTH_23
HTH_24
HTH_11
HTH_30
PF0610-like_N
Talin_R4
HTH_20
HTH_28
DUF7523
Motif
Other DBs
NCBI-ProteinID:
ACU64446
UniProt:
A0A979H036
LinkDB
All DBs
Position
complement(8816059..8816565)
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AA seq
168 aa
AA seq
DB search
MAAYECIYNKYWPLLYGYVYNRLKSKEITEEIVQEVFFSLWNRRAALQLTQTLSAYLYTA
VKYQIFNYMKADRVRKTYAGAFSRYNEQLQDNSNEEYMTYADLANAVEKEVSRLPEKCQQ
VFRMSRNEHRSIQDIAAALNISHKTVENHLTKALKHLRLAFREYFWLF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctacgagtgtatctacaacaagtactggccgctgttatatggctatgtgtat
aatcgcctgaaatcaaaggaaataacggaagaaattgtccaggaggtattcttctctctc
tggaacagacgggcagcgctgcagctcacacagacactctctgcctatctttatacggct
gtcaaatatcagatcttcaattacatgaaggccgatagggtacggaaaacctatgcgggt
gctttttcccgctataacgaacagctgcaggacaactcgaatgaagaatacatgacctat
gctgacctggcaaatgccgtagaaaaggaagtttcccgcctgcctgaaaagtgtcagcaa
gtgttcagaatgagccggaatgagcatcgctctatccaggatatcgctgctgctttaaat
atctctcacaaaacggtagaaaaccatctgacaaaagccctgaagcacctgagactggct
ttccgggaatatttctggcttttttag
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integrated database retrieval system
