Chitinophaga pinensis: Cpin_7236
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Entry
Cpin_7236 CDS
T00959
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpi
Chitinophaga pinensis
Pathway
cpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpin_7236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpi03021
]
Cpin_7236
Transcription machinery [BR:
cpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpin_7236
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ACU64636
UniProt:
A0A979GBX1
LinkDB
All DBs
Position
complement(9043642..9044169)
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AA seq
175 aa
AA seq
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MIRTDSVDAFNEVYNRYWDILYHITLKRLQVKEVAEEIVQDTFIILWEKRHDIEISVLKH
YLFAITRYAVFHYLAKQQTIAARMKALSHTPQLAGGNADLENLVSDRLLLQLIETISNEL
PEKSRQVFRYNKLLDHSLLQAAKTFDISPKTAEGHLTKALKTLRVKLSALYSTVL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggactgactcggtagacgcttttaacgaagtgtacaaccgttattgggacata
ctgtatcatattaccttgaaacggctgcaggtgaaggaagttgctgaggagatcgtgcag
gacaccttcatcatcctttgggaaaaaaggcatgatatcgagatctccgtactgaaacat
tacctttttgccatcacccgttacgccgtatttcattatctcgcaaagcaacagacgatt
gctgcccgtatgaaagccctgtcacatacgccacagttggcaggtggaaatgcagatctg
gaaaaccttgtcagtgaccgtttattattacagctgatcgaaaccatctcaaatgaattg
ccggagaaaagcaggcaggtgttccggtataataaattgctggatcactctttattacag
gcagcaaaaacttttgatatatctcccaaaacagcagaaggacatctcacgaaagccctg
aagacgctacgggtgaaattaagtgcattgtatagtaccgttctctga
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