Chrysemys picta (western painted turtle): 101930808
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Entry
101930808 CDS
T04662
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101930808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101930808
03036 Chromosome and associated proteins [BR:
cpic03036
]
101930808
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101930808
Coactivators
SAGA/TFTC/STAGA complex
101930808
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101930808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
DUF1955
Presenilin
Motif
Other DBs
NCBI-GeneID:
101930808
NCBI-ProteinID:
XP_005289981
LinkDB
All DBs
Position
15:19113357..19326520
Genome browser
AA seq
1021 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEGPPPNSSPPSHQQQEHQ
GSLVEGGSPVQQQQQGHPAPPHFPGAGETARCPSAVGSPPPAQGAPPALSPSAAAAAGRG
ASVNSSSMQQSHGAAPCSSNPSAPAAPVPLQSAAPPPPVGAPAQPVSNHVDANAAAPAVG
SGAREVESPRHGCSPPAAAAGAVNSVLLLNSEAATAGGSPEAAGAVTPVAAAAASRELAK
AVMLSSTAAAPPPALSLLQRPALHSVPPAAHSGNGTSSSAPVVVTQSLKAGCAPAAITQV
VNHQNPAVSHSKPDSSTAQTKLLTHNPAVNALSNSTSSVPTMNLVTHPAQSSVANCAPVV
SSPITLTAISKPTVNIIGPPGSAVGVAKSATAVPVVSAVPQSLSPRPAVGTAQRIVAPQL
IVRPPQQTTIQLPPGFTIPPGMVLVRTEAGQLVMVPQQVLAQAQVQAQVQTQGQGPASIS
PRLSVPTSGPVFRLTTTQQPTSVAASAVHLGLPRQAKVVQSTATPVSATSTATLHGGSTL
SHTTVSIATTSAQNLIKATVATGTPATQQPTVIFGGQTQTPVQPQGQPRLPLPPHTTAQV
PAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSHNVKALVQDL
LDAKIDPEEFTGCLQSELKSSPQPYLVPFLKIIQSTSAQTAKRNPACQTTQIRMPVVITQ
TIRPQGTVGKAPTIQASQSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNL
NEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAKKLGITDVPTEVVTFISHA
TQNRLRTVIEKVTMVTQHRMESHKDDEWYEQATDVRSQLKFFEQLEHLEKQRKDEQEREI
LLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSAGL
LTIGGEVLGMTSGSQAGFGAPSSRQYARQKITRVNLRDFIFYMEQERETSHSLLLYRALL
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgcttttctccgaagaggtggat
gagaaggcggtcagcgacctggtgggctccctggaatcacagctggccggcgggaggggc
tccgccgagggccccccccctaacagcagccccccatcccaccagcagcaagagcaccag
gggagcctggtggagggcggcagcccagtccagcaacagcagcaagggcatcctgctcct
cctcatttccccggggcaggggagaccgccaggtgtccaagtgccgtgggcagcccaccc
ccagcccagggggcacccccagccttgtccccctcagcagcggcggcggccgggagggga
gcgagtgtaaacagtagtagcatgcagcaatcacatggagcagctccttgcagcagcaac
ccgagtgcacctgctgcccctgtcccactgcaatccgctgccccacctccgcctgtcggc
gccccagcccagcctgtcagcaaccacgtggatgccaatgccgctgctcccgctgttggc
agtggtgcccgggaagtggagagtcccagacatgggtgtagtcctcctgcagcagccgct
ggtgcggtgaacagtgtgttgctgcttaactccgaggccgccactgctggagggtcgcct
gaggctgccggggctgtcactccagtagcagcagccgcagcaagtcgggaacttgcaaag
gcggtaatgctgagtagtacagctgctgctcctcctcctgctctctctcttctccagaga
cctgcactgcattctgttcctcccgcggcacacagtgggaatggcacttcctccagcgct
cctgtggttgtcactcagagtctaaaggctggttgtgccccagcagcaataacacaagtt
gtcaaccatcagaatccggctgtcagccacagcaaaccagactcctccacagcacagact
aaactcctcacacacaatcctgcagtaaatgcactcagtaactctactagttctgttcct
acaatgaaccttgtcacccatccagcccaaagttcagtagccaactgtgcccctgtagtg
tccagcccgatcaccctcactgctatatctaaacccacagttaatattatagggccacct
ggctctgctgttggtgtagccaaatcagccactgctgtacctgtcgtctctgcagtcccc
cagtcgctgtcacccaggcctgcagtgggcactgctcagagaatagttgcaccacaattg
attgttagaccgcctcagcagactacaatccagttgcctccaggttttactataccacct
ggtatggtcttggtgcgcacagaagctggacagcttgtaatggtacctcagcaggtttta
gcccaggctcaagtgcaagctcaagtacaaacacaggggcaaggtcctgccagcatctca
cccaggctttcagtgcccacaagtggtccagtttttcgtttaacaacaacccagcaacca
acttctgtagccgcatctgctgtccacctgggacttccaaggcaagccaaagttgtacag
tcaactgctacaccagttagtgctacatctactgcaaccttacatggaggctccactctg
tcgcacactacagtatcaatagctaccacaagtgctcagaacttaattaaagcaacagta
gcaactggaaccccagcaactcaacaacctacagtaatttttggaggacaaactcaaacc
ccagtacaaccccaaggtcagcctcgattgccacttccacctcatacgacagcacaagta
ccagcacagccccaggtcatacctagctctcctgtaccagggactaccgttgtatcacag
gaaatgcaagagaatgtgaagaaatgcaaaaactttttagctaccctgataaaacttgct
tcccataattcaccttctccagaaacatcccataatgtgaaagctctggttcaggatttg
ctggatgcaaagattgatccagaagaatttacaggctgccttcagtcagagctgaaatca
tctcctcagccatatctagtacctttcctgaagatcatccagtcaacatctgctcaaact
gcgaaacgaaaccctgcttgccagactacccagattaggatgccagtggtaataactcag
accattagaccacaaggcacagtagggaaggcaccaacaatacaagccagccaaagtcct
gggggctttggtgttcaggtctctgcaaatcagaaaaacaagttgaatgaccctggaggt
ggatctttcagagatgacgatgacatcaatgatgttgcctctatggctggagttaacctt
aatgaagaaagtgcccgaattatggcaaccaactccgacttggttggaacccagatacag
tcttgtaaagatgaaccctttcttgctgctatccctttacataaacgaatactagaaatg
gctaaaaaattaggaattacagatgtgcccactgaggtggttacctttatttcccatgca
acacaaaaccgattgagaacagtgatagaaaaagtaacaatggtaacacagcaccgaatg
gaatcgcacaaagacgatgaatggtatgaacaggctacagatgttcgatcacagctgaag
ttttttgaacagttggagcatttagaaaagcaaaggaaagatgaacaagagagggaaatt
ttgttaaaggcagccaagagtcgctcaaggcaagaagacccagagcaagctaggctgaaa
caaaaagcaaaggagatgcagcaacaagaactagcacagatgaggcaaagggatgccaac
ctaactgcattggcagctattggtccacggaagaaacggaagcttgattcagctggctta
cttaccataggaggagaggttttgggcatgaccagtggaagtcaggctggttttggggct
ccttcatccagacagtatgcacgacagaaaataactcgagtaaacctcagggacttcatc
ttttacatggaacaggaaagagaaactagccattctctcctgctctacagagctttgctt
aaataa
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