Chrysemys picta (western painted turtle): 101930909
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Entry
101930909 CDS
T04662
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X3
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101930909 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpic03009
]
101930909 (POP1)
03016 Transfer RNA biogenesis [BR:
cpic03016
]
101930909 (POP1)
03029 Mitochondrial biogenesis [BR:
cpic03029
]
101930909 (POP1)
Enzymes [BR:
cpic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
101930909 (POP1)
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
101930909 (POP1)
Transfer RNA biogenesis [BR:
cpic03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
101930909 (POP1)
Mitochondrial biogenesis [BR:
cpic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
101930909 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
101930909
NCBI-ProteinID:
XP_008166574
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MSNAREKKRAKKMRNQPASVTLSSDCGPCPSGIQHHNGGSRSFQTPKQDLHPDSSQEFQQ
QRHQHQSPGPSYRKEQYFSKGQSRGRGGWRGGHQNVSQEMPKYVTASTFAQARAAEINAM
LKAVTQKSSNSLVFQTLPRHMRRRAMSHNIKRLPRRLREIARKEAEKAVHQKKEHSKNKC
RKARRRHVNLVVEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGDRPTTKSYRACYRAM
TKHCLLQDLSYYCCLELNGKEEELLKVLARMCSIDTGPTFAAVPCLSGRLQGSLVLYRAD
RYPEDLLGPITFIWKPKDGSGITSETRQLWIWTHPSLKQDILTELKTVFQCSEPVKTCSP
EPIVTLLQEEKQTDVAMIVGKKRKREDNEGEQAVPLKKIIGDGTRVPLQSYCWTSQTTGV
VISDLTMEILRYRLIGPLSHCVLTEALKTASIQTEMADAETELNNWWVENCKNSEKVSLH
QRQEAIFELLQGISSPSEIAAGTILGLTVGDPRVNLPKKRSKAMPNPEKYQDNEKVRQLL
LEGVPLECAHSFIWDQTICKNVTENKISEQDLNHMRGELLVPGSQLDLGPCESKIPILLV
QQPGKVAGEDRPGWGSGWDIYLPKGWGMAFWIPFVYRGARVGGLQEGMKHSEYKRSPHIP
NDFPDCPAGIQFAKELENVLLEKFKRRPPAKRANYVKLGTLAPFLCPWGQLTRDWEVRNK
AQEESVVTSSAESKSSATERQVPCEPKPGLIIEDSQGDMMEEMAKIQNLCKEDGAATSSG
FFVLRNRKLLKQLSARCRPTCGKGQRVRPASKLGQKEMTEDALLSIFKCYPRVLVWVSLS
LLRKGSPELHAMICIPTQEDFLQLNKDQLFCGPQEPKHSDIFKHKILKLKERKKKKNNGN
ALESGASDALEAKAVEEPKELILGLWPDPLPDVTSHCSRILLGFVTQGDFSLAAGCGEAL
GFVNLTGLLHMLSSQPTDKKGLVLLRTPASLQYRFARLNIEV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaagagagaagaaacgtgccaagaaaatgagaaatcagcctgccagtgtc
accttatcttctgattgtggaccatgtcctagtggaatacagcaccataatgggggaagt
agatcttttcaaactccaaaacaagatctccatcctgatagttcacaggagtttcagcag
cagagacatcaacatcagtctcctggaccttcgtacaggaaagaacaatatttttctaag
gggcaaagtagaggaagaggaggctggagaggaggacaccaaaatgtttctcaagaaatg
cctaaatacgtaacagcatctacctttgctcaagcccgtgctgctgaaatcaatgctatg
ttgaaggcagttacacagaagtcttccaattcgttagtttttcagactctgcctaggcac
atgcgaagacgagccatgagtcacaatattaagcgcctacctagacggctccgtgagatt
gccagaaaagaggcagagaaagctgtgcatcagaaaaaagagcattcaaagaacaagtgc
cgaaaagctcgaaggcgtcacgtaaacctggtggtggagtttaatcgcaggcagaagaag
aatatttggttggaaacacatatttggcatgcaaagagatttcatatggtgaagaaatgg
ggatattgcttaggagacagacccacaactaagagctatagggcttgctaccgagccatg
acaaaacactgccttcttcaggatttatcatattactgttgcctggagctgaatggaaaa
gaggaagagcttctgaaggtgcttgctcggatgtgtagtatagatacaggaccaactttt
gcagctgtgccttgtctgtctggaaggctccagggctctctggtcctttaccgtgcagat
cgctaccctgaggatttgcttggtcctattactttcatttggaaacccaaggatgggtct
ggtattacttctgaaactagacagctgtggatctggacacatccatcccttaagcaggac
atactgactgagctaaaaacagtctttcagtgttcagagcctgtaaaaacctgttcccct
gaaccaattgtcacattgcttcaagaagaaaaacaaacagatgtagctatgattgttggc
aagaaaaggaagagggaagacaatgaaggagaacaagctgtgccattgaaaaaaatcatt
ggtgatggaaccagagttccacttcagtcatactgctggacatcacagactactggcgtt
gtgatcagtgatttgaccatggagattctccgatatcggttgattggcccgctctcgcac
tgtgtccttacagaagcactgaaaactgcttctattcaaactgagatggcagatgcagaa
acagaacttaacaactggtgggtagaaaactgcaagaattctgagaaggtgtctcttcat
caacgtcaagaagccatcttcgagttgttgcaaggcataagctctccatcagaaattgcg
gcaggtacaatactgggcctgactgttggggatcctcgagtgaatttgccaaaaaagagg
tcaaaagccatgccaaatccagaaaaatatcaagataatgagaaagttaggcagctgctt
ctggaaggtgtgcctttggaatgtgctcacagctttatctgggaccagactatctgtaag
aacgttactgaaaataaaatctcagagcaggatttaaaccatatgagaggtgaactattg
gtacctggctcacagcttgacttgggtccttgtgaatccaagattcctatactcttggtt
cagcagccagggaaagtggctggtgaagatcgaccaggatggggaagtggctgggatatc
tatctcccaaagggctggggcatggctttctggattcctttcgtatatcgaggtgcacga
gtaggcggcttgcaagagggtatgaaacattccgaatataaaagatcacctcacattcca
aatgacttcccagactgtcctgctggaatccagtttgccaaagaactagaaaatgttctt
cttgaaaaattcaagagacgcccacctgcaaaaagggcaaactatgtcaaacttggcacc
ctggcacctttcctctgcccatgggggcaactaaccagggactgggaagtaagaaacaaa
gctcaggaagaatctgtggttacttcatctgcagaaagtaagagcagtgcaactgaaaga
caggttccttgtgagcccaaacctggactgattatagaggattctcagggtgacatgatg
gaagaaatggcaaagattcaaaatttatgcaaagaagatggagctgcaacaagtagtggc
ttctttgttctcaggaacagaaaactattaaagcagttatcagcgaggtgccggcctacc
tgtggaaaaggtcagagagtacgccctgcttcaaaacttggacagaaggaaatgactgaa
gatgccctcttatcgatctttaagtgctacccaagggtgctggtgtgggtcagcttgtct
ctgctaagaaagggtagccctgaattacatgccatgatatgcattccaacacaggaggat
tttcttcagcttaacaaagaccagctcttctgtggtcctcaagagcccaaacacagcgac
atattcaaacacaagatactgaaactaaaagagagaaaaaagaaaaagaacaatgggaat
gctctagaaagtggtgcttctgatgccctggaggcaaaggcagttgaggagcctaaagaa
ctaatacttggcttatggcctgaccctctaccagatgttacttcacattgctctagaatt
cttttagggtttgtcactcaaggggatttttcattagctgctggctgtggagaagcactg
ggatttgttaatttgacaggtttactacatatgttatccagtcaaccaaccgataaaaaa
gggcttgttttgttaagaactccagcatctctgcagtacagatttgctagacttaatatt
gaggtataa
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