Chrysemys picta (western painted turtle): 101931040
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Entry
101931040 CDS
T04662
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101931040 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101931040 (TAF4)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101931040 (TAF4)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101931040 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
101931040 (TAF4)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101931040 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
101931040
NCBI-ProteinID:
XP_005302985
UniProt:
A0A8C3IUI1
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSPSPSPGGVVVGGNANVQTESSSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQSSALDGVTTTSTSTTTAAAAAGGGSEAAAAPGTLSQGKSVVISTMATALSTRNGKIGT
TTVQTLNGSNVVMNSHHSGSAAFSGTPATANPAAAPAVAPLVNNGPGSVGKGNTVNAVLP
SASNTVIQTSFLSTAVSSASSSSPTVISSQPPPSIVGGGPTVALVRPPIHTAGPTVAAAA
AATQNGSNTVINSAIGVGSFPAVAAVTVGSGVSLQTSLVNSQPGSSVPAAPTTQVIKSES
PKTIVHAVSQQQTLVASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMVK
GTASTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQAPQNPTNIQNFQLPPGMVLVRSEN
GQLLMIPQQALAQMQAQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVPAPGTPIIARQV
TPTTIIKQVSQAQTTVQPTTTLQRAPVVQPQIVLGGTAQTTALGTATAVQTGTQRTVQGA
TATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETTANVKELVQNLLDGKIEAEDFTS
RLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVGKQGQPTPLVIQQSQKGGALIRPPQVTLT
QTPMVALRQPHNRIMLTAPQQIQLNQLQTVPVVKPTVLPGNKALSTVSAQAAAAQKNKLK
EPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPASLQRR
ILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNVSYKDDERYEQASDVR
AQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQ
RDANLTALAAIGPRKKRKVDSPGSGSGTEGSSTSTPVPGSSGVGTTRPFTRQRITRVNLR
DLIFCLENERETSHSLLLYKAFLK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccatcaccac
cagcaccacaaggcgcaggagcccctcagggccgctggggggctgctggggaaccatgtt
gtgagcagcagtagcagcagcagccctagccctagccctggaggagtagtagtaggaggc
aatgctaatgtccaaacagagagcagcagcagcagcagcaagatgggactcagtgcccca
gagatcacaaaagcaggagctggaggagtgcaagggggcgttattaatcataacaccagg
tcccagagttcagctctggatggagtcactacaaccagcaccagcaccaccaccgcagca
gcagcagcaggaggaggatctgaagctgctgctgctccagggaccctcagtcagggcaaa
tcagtggttatcagtaccatggcaactgccttatccaccaggaatggcaaaattgggacc
acaacggtgcaaactttgaatgggagtaacgtggtgatgaactctcaccattcgggaagt
gctgctttctctgggactcctgcaactgctaatcctgctgctgcacctgctgttgcccct
ctagttaacaatggacctggatctgtggggaaaggaaatacagttaatgctgttttgcca
tcagcttctaacactgtcatccagacttctttcctcagcactgctgtgtcctccgcctcc
tcctcatcacccacagtaatctcttcgcaaccgccaccaagcattgtaggtggggggcct
actgtagcactggtgaggccaccaattcacacagcaggacccacggttgctgcagctgct
gcagccacccagaatgggagcaatactgtgatcaattcagccatcggtgtggggagtttt
cctgctgttgctgcagtcactgtgggttctggagtttccctccaaacatcacttgtgaac
agccagcctggttccagtgtgccggcagcacccaccacacaggtcatcaaatcggagtct
cctaaaactatagtgcatgcagtatcccagcagcagacactagttgctagtggccagccc
agtactacagggggtaatatgataattgggcaaactatgcaagctgggctctccaatgtg
gcccccaatcccggtgggatacctcctgcagctcctggtacccctacaggaatggttaag
ggcactgccagtacagtggcacaaagtctgccaaggactccaacagcaactacaagtggt
atcagagcaactttaactcctacagttttagcacctcgtctgcctcaggcacctcagaat
ccaactaatattcagaactttcagttaccaccaggcatggtccttgtgcgtagcgaaaat
ggacagttactgatgatcccgcaacaagccttggcacaaatgcaggcacaggcacaggca
catgcccaatcccagccccaaaataccatgactcctcgtcctgcaacacctaccagtgca
ccaccagtacagatatcaacagtgccggctcctggaacgcctataattgcacggcaggtg
acaccaactactataatcaagcaggtgtctcaggctcagacaactgtacagcccacaaca
acattacagcgtgctcctgtagtgcagcctcagattgttctgggtggtaccgcacaaaca
actgcattaggtacagcgacagctgtacagactggaactcagagaactgtgcaaggagca
acagcaacctctactgctgccacagaaactatggagaatgtgaagaaatgcaagaatttt
ctatccacattaataaaactggcttcatctggaaaacagtcttcagagactacagctaac
gtgaaagagctagtacaaaacttgttggatggaaaaattgaagcagaagattttaccagt
aggctgtaccgagaacttaattcttcacctcaaccttaccttgtgcctttcctgaagagg
agtttacctgccttgagacagttaaccccagactcggcagctttcattcagcaaagtcaa
cagcagcagcccacaacgcaagcaacaaccgcgctgacagcagtgatgctgagcagctca
gttcagcgcacagcggggaaggccactgccactgtaacgagtactctccaacagcctgta
attagtctaactcagcctacacaagttggggttggcaaacaagggcaacctacacctctg
gttatccaacagtctcagaaaggaggggcattgataaggcctccacaggtaacgttgaca
caaacccctatggtagcattgcggcaaccacataatcgtattatgcttacagctcctcaa
caaattcaactgaatcaacttcagactgtccctgtggtaaaaccaacagtattacctgga
aacaaagctctgtccactgtttcagcacaagcagctgccgctcagaagaataaactgaaa
gaacctgggggaggttcttttagggatgatgatgatattaatgatgttgcatcaatggct
ggagtcaacctatcagaagagagtgcacggatattggcaacaaattctgagttagtaggc
acattaacaaggtcctgtaaagacgaaaccttcctacttccagcatctttgcaaagaagg
atactagaaataggtaaaaaacatggaataacggaaatccatcctgatgtagttagctat
gtatcgcatgcaacacaacagaggttacagaatcttgtagaaaaagtatcggagactgcc
caacaaaagaatgtttcttataaggatgatgaaagatatgagcaagcaagtgatgttcgg
gcacagctcaagttctttgaacaacttgatcaaatagaaaaacagagaaaagatgaacaa
gaaagggaaattttaatgcgtgcagcaaagtctcggtctagacaagaagacccagaacag
ctaaggttgaaacagaaggccaaggagatgcagcaacaagagctagcacaaatgagacag
agggatgccaacttaactgcattagctgcgattggtcctagaaagaaaagaaaagtggat
tctccaggatctggatcagggacagaggggtccagtacaagtacaccagtcccaggcagc
tctggagtcggaacaaccagaccgtttacgcgacaaaggataacgcgggtgaacctcagg
gacctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaa
gcattccttaagtaa
DBGET
integrated database retrieval system
