Chrysemys picta (western painted turtle): 101931213
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Entry
101931213 CDS
T04662
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X2
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03440
Homologous recombination
cpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101931213 (BRIP1)
03460 Fanconi anemia pathway
101931213 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101931213 (BRIP1)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101931213 (BRIP1)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101931213 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
101931213 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
101931213
NCBI-ProteinID:
XP_023955454
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MSSVVSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSV
LSWQQSLHEKSLDEFSCEKECKKPETSLPCHCRCHSQAVTNDTTADVNQGASCSFTNCKA
ATSIKSETPSTDKEHNAKVTLSSKLSAKKWASLHRDENDDFQVDRKRIRLLETEQQVRKR
HCFAKGVQFVDALEVYQQRRNGELTVHSEKIAAFSPKTSPGPCTQCSCSSAKENCKNVSN
AKRKENGGKPHIPKIFFGTRTHKQIAQITRELQRTVYSSVRMTILSSRDHTCVHPVVSRS
SNRNEKCADLLEGKNGGSCVYYHGVHKLSEHHALQFARKKCQAWDIEDLVSLGKKLRACA
YFAARELMVGADIVFCPYNYLLDPQIRESMEINLKDQVVILDEAHNIEDCARESASYSVT
ETQLRFAREELDIMVVNNIRRKDHDPLRAVCYSLTNWLQESSGQLKERGYETSCKVWSGK
EMLTILHNMGITNATFPILQKHFAAVLEKEEKVSNLHEGDELIEVPIVSPATQIVLKGLF
MVLLYLFKDNNRFADDYRVALQQTYVWTNEKQLDIPDKNAFFVQPKHQRSSRQKTAVHTL
NFWCLNPAVAFSDLSGNVRTIVLTSGTLSPMDSFSSELGVKFTIQLEANHVIHNSQVWVG
TIGAGPKGRKLHATFQHTETFEFQDEVGALLLSVCQTVGQGVLCFLPSYKLLDKLKDRWM
HTGLWRNLELVKTVIAEPKGGDKADFDALLQIYYDAIKYKGGKDGALLIAVCRGKVSEGL
DFSDDNARAVITIGIPFPNVKDLQVELKRKYNDQHSKTRGLLPGSQWYEIQAYRALNQAL
GRCIRHKKDWGALVLVDDRFRSNPNKYITGLSKWVRQQIQHHENFSTALESLDAFAKKNQ
EGAGSSTQCNSESLLIHSSSKDLSPTSLWEASIHLSPDVPVESKVQNLVLEAHSPTAVNT
VNPTASSQSSNSMATKKNGQNFGVENHSHQTVRREKHMDSKPKSPAIKKEREKRNSWTNA
DLMKQYFSNKPLTSTPLPVNEKPCISKAMCKQKRRTIESSQPVVNERQCQLSLLTPSGPA
LQLETTSSAICEAATAEEHPAEQHLCTNRVIDQCIELSPVRGKIELSMLNVAIEAEAEDD
SIYFTPELYDDIEPEEQQIEPLIQTCNNTVNQNEHGACIVAEDLFEISTSKVVSSIGEIK
SNDNMNTELAIIMQNDKIKGNTVSDAESVTRVGEVEQKKYQEMDTRKKKSKLSRSRNKGV
SSFSLSSTSP
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggtagtgtcagaatataccattggtggggtgaagattatctttccttgcaag
gcttacccttcacagcttgctatgatgaatgcaattgttaaggggttaaattccaggcaa
cattgtttgttggagagccccacaggaagtggtaaaagtttggcgttactttgttctgta
ttgtcatggcagcagtctctgcatgagaagtcactggatgagttctcatgtgaaaaggaa
tgcaaaaaaccagagacttcattgccatgtcactgtagatgccattcccaggctgtgact
aatgacactactgcagatgtgaaccaaggtgcttcttgttctttcactaattgtaaagca
gcaacttccataaaaagtgaaacaccatcaacagacaaagaacataatgcaaaagtcaca
ctgtcttcaaaattatctgcaaagaaatgggcatctttacatagagatgaaaatgatgac
tttcaagtggacaggaaaaggatacgtttattagaaactgagcagcaggtaagaaaacgt
cattgttttgcaaagggagtgcagtttgttgatgctttggaagtttatcaacagcgaaga
aatggggaactgactgttcactcagaaaaaattgctgctttctctccaaaaacgtctcct
ggcccctgcacacaatgttcctgttcttctgcaaaagaaaattgtaaaaatgttagtaat
gcaaagaggaaggaaaatggaggaaagccacacatccccaaaatattttttggaactcga
acacacaagcaaatagctcagattactagagagctgcagaggacagtgtactccagtgtc
cgtatgacaattctttctagccgggatcatacctgtgttcatccagtggtatccagaagt
agtaacaggaatgaaaaatgcgcagacttgctggaaggaaaaaatggcgggtcctgtgtt
tactaccatggtgtccataaacttagtgaacatcatgctctacagtttgcacgtaagaag
tgtcaggcttgggacatagaagatctagtaagcctgggaaagaagctacgtgcatgtgcc
tattttgcagctcgagaactcatggtgggcgcagatattgtattttgtccttacaactac
ctgctggacccacaaataagagagagtatggagattaacttaaaagaccaagtagtcatt
ttagatgaagctcataatattgaagattgtgcacgggagtcagccagttacagtgttaca
gaaacacagctgagatttgctcgagaagaacttgatatcatggtcgtcaacaacatcaga
cggaaggaccatgatcccctgcgggctgtgtgctacagtctgacaaattggctgcaggaa
agctctggtcagcttaaagaaagaggatatgaaacctcctgtaaagtttggagtggaaag
gaaatgctcaccattttgcacaatatgggaataacaaatgctacatttcctatcttgcag
aaacattttgcagctgtccttgaaaaagaagaaaaagtatcaaatcttcatgaaggagat
gagcttattgaggttcctattgtgagccctgccactcaaattgtgctaaaagggctattc
atggttctgctatatctttttaaagataacaacagatttgcagatgactacagagttgct
ttgcaacaaacatatgtttggacaaatgaaaagcaacttgatattccagataaaaatgct
ttttttgtacaaccaaaacatcagagaagttcacggcagaaaacagcagtccatacgctt
aacttttggtgcttgaatccagctgtggccttttcagatttaagtggtaatgtcaggaca
attgttctaacatctggtacgctctctccaatggactcattttcttcagaacttggtgtg
aagtttactatccagcttgaggcaaatcatgttattcataactcacaggtttgggttggc
accattggggcaggccccaagggtcggaagctgcatgccacattccagcatacagagacc
tttgaattccaggatgaagtgggagcacttctgctttcagtgtgtcaaactgttggccaa
ggggtcttatgctttttgccatcttataaattgttggataaattaaaagatcgctggatg
catactggcttatggagaaacttggagcttgttaagacagtaattgcagagcctaaagga
ggagacaaagctgactttgatgcactgctccaaatatactatgatgcaataaaatataaa
ggaggaaaagatggagcacttctcatagcagtatgcagaggtaaagttagtgaaggcttg
gatttctctgatgacaatgcccgtgctgttataactattggtattccatttccaaatgtg
aaagaccttcaggttgagttaaagaggaaatacaatgaccagcactcaaagacaagaggc
cttttaccaggtagccagtggtatgaaattcaagcttacagagctctcaaccaggcactg
ggcaggtgtattcgtcacaaaaaggattggggtgctcttgtgttagttgatgatcgcttc
aggagtaaccctaataaatacataactggattatccaaatgggttcgtcaacaaatccag
caccatgagaactttagtactgcacttgagtcgttggatgcatttgctaaaaaaaatcaa
gagggtgctggttcttcaacccagtgtaatagtgaatctctgcttatacattcaagttca
aaagatctgtcaccaacttcattatgggaggcatctattcatctgtcaccagatgttcct
gttgaaagtaaggtgcagaatttggtcctggaagctcattcgcctacggcagtcaacaca
gttaatcctacagcatccagtcaatcaagtaacagcatggcaacaaagaaaaacggtcag
aattttggtgtagaaaatcattctcaccaaacagtgcggagagaaaaacatatggattcc
aaaccaaaaagtcctgccatcaaaaaagaaagagagaaaaggaatagttggactaatgct
gaccttatgaaacaatacttcagcaataagccactgacttcaacacctctgcctgtgaat
gaaaagccatgcatctccaaagctatgtgcaaacaaaaaaggagaactattgaatctagt
cagcctgttgttaatgaacgccagtgccagttgtcattgcttacaccaagtggaccagca
ttacaactggaaacaactagttccgcaatatgtgaagctgcaactgctgaagaacatcct
gctgaacagcacctctgcactaatagagtcatagatcaatgcattgagttatctccagta
agaggaaaaattgaactttcaatgttaaatgtagccatagaagcagaagctgaggatgac
agtatctattttacacctgaactttatgatgatatagaaccagaggaacagcaaattgaa
ccattaattcaaacgtgtaataatactgtgaatcagaatgaacatggagcttgcattgta
gcggaagatctttttgaaatcagtacttcaaaagtagtaagctcaattggagaaataaaa
agtaatgataacatgaacacggaattagctataataatgcaaaatgacaagattaagggt
aatacagttagtgatgctgaaagtgttactagagtaggagaagtagaacagaaaaaatat
caggaaatggacaccagaaaaaagaaaagtaaactttccagatcacgaaacaaaggtgtg
tcttccttctcattgagcagtactagtccatag
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integrated database retrieval system
