Chrysemys picta (western painted turtle): 101931551
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Entry
101931551 CDS
T04662
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X16
KO
K24356
collagen type XXV alpha
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpic00536
]
101931551 (COL25A1)
Glycosaminoglycan binding proteins [BR:
cpic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101931551 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101931551
NCBI-ProteinID:
XP_023962606
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MLGKSQEAKRQDGNGEPSCLGGQRCCPSWTLPSSSLLAAFLSVVAVASCVYLGVKTSDLH
ARVSAIESAQGDFSAAAASSYQLLPGFSLDQLNSMMQEKVERLLAQKSYEHLAKIRIARE
APPECNCPAGPPGKRGKRGRRGETGPPGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHG
FLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQ
GWMGPQGPPGQKGSVGVPGVPGIDGHMGEPGLPGAVGERGAPGLKGDPGERGEKGDAGEN
GSKGDMGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPG
LPGLPGTKGERGEAGPPGKGERGEPGVPGPKGKSGESGTRGPKGSKGDTGDKGDSGAIGP
RGPPGQKGDQGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGAQGPKGEPGSQGTPG
AEGEQGPKGSKGDVGESGMPGEKGGIGLPGLPGANGMKGEKGDGGLPGPQGPSIIGPPGP
PGPHGSPGPMGPHGLPGPKGASGLDGKPGPRGMDGPLGPHGPAGPKGDRGEKGAVGDPGS
RGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQL
GPDGLPMPGCWQKGVTPWLIAKKR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgttggggaaaagccaagaagccaaaagacaggatggcaacggggagccgagctgcctt
gggggacagcgctgctgtcctagctggactctgccctccagttcgctgctggctgctttt
ctgtcagtggtggctgtagcctcctgtgtgtatctgggggtgaagaccagtgatctacac
gcgagggtctctgccatcgagagcgcccaaggggacttctctgctgctgctgcttcttct
taccagctgctgcccggtttctccctggatcagctaaattcaatgatgcaagaaaaagtg
gagcgacttctagctcagaaatcctacgagcatttggcaaaaataagaatagcaagagaa
gcgcctccagagtgcaactgcccagcaggccctcctgggaaacgaggtaagaggggcaga
agaggagagaccggacctcctggtcaacctggtcctcaaggtcctcctggtccaaaaggc
gagaagggagatcaaggtgatcagggccctcggatggtgtttcctaaaatcaatcatggg
tttctctctgctgatcagcagctcattaaacgccgcctcattaagggtgatcaaggacaa
gctggaccccctggtcctccagggccaccaggacccagaggtcctccaggagacactggc
aaagatggcccccgagggatgcctggagtaccgggagagccaggaaaaccaggtgaacaa
gggtggatggggcctcagggacctccaggacaaaagggttctgttggagtgcctggtgtt
ccaggaatagatggacatatgggtgaaccaggtttgcctggtgcagtgggagaacgcgga
gcaccagggcttaagggtgaccctggagaacgaggagaaaagggtgatgctggagaaaac
ggatccaaaggtgacatgggtgaaaagggtgatcctggatcttctgctgcaggaattaag
ggagaacctggagaatctggtcggccaggacaaaagggtgaaccaggtcttcctgggctt
cctggactccctgggataaagggtgaaccaggtttcattggtccacagggagaacctgga
ttaccagggttaccaggaacaaagggtgaaagaggagaagcagggcctcctggaaagggt
gaacgaggtgaacctggagttcctgggccaaaggggaaatcaggcgaatctggaactaga
ggcccaaaggggtcaaagggtgatactggagacaaaggtgattcaggagcaataggtcct
aggggcccgcctggacaaaagggagatcaaggtgcaacagagataattgactacaatggc
aatatccatgaagctctgcagaggattaccaccctaactgtcacgggtccaccagggcca
cccggacctcaaggagcacaaggcccaaagggtgaaccaggatcccaaggaactccagga
gctgaaggggagcagggtcctaaaggctcaaagggggatgtgggtgagtctggcatgcca
ggagaaaagggaggaattggactcccaggcttaccaggagccaatggtatgaaaggagaa
aaaggagatggtggtttgcctggtcctcaaggtccttctatcataggacccccaggacca
ccagggccgcatgggtcaccaggccctatgggaccccatggactgcctggcccaaaggga
gcatctggcttagacggaaagccaggaccccggggtatggatggcccactcggtccacat
ggcccagcaggtcctaaaggagacagaggtgaaaagggagctgttggtgaccctggatcc
agaggaccatatggtttgcctggcaaagatggcgagcctggccttgatggtttccctggt
cctcgaggagaaaagggtgatctaggcgaaaagggagaaaagggattccgtggaattaag
ggggaaaaaggggagccaggccagccaggcctggatgggctggatgccccttgccaattg
gggccggatggattaccaatgcccggctgctggcaaaagggagtcacaccgtggcttatt
gccaaaaagagataa
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